Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 MIR935-201ENST00000401179 91 ntBASIC19.93■□□□□ 0.78
UBFD1O14562 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBFD1O14562 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBFD1O14562 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBFD1O14562 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBFD1O14562 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
UBFD1O14562 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
UBFD1O14562 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBFD1O14562 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.92■□□□□ 0.78
UBFD1O14562 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.92■□□□□ 0.78
UBFD1O14562 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBFD1O14562 AC245052.3-201ENST00000450182 901 ntBASIC19.92■□□□□ 0.78
UBFD1O14562 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.92■□□□□ 0.78
UBFD1O14562 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.92■□□□□ 0.78
UBFD1O14562 AC104187.1-201ENST00000607510 612 ntBASIC19.92■□□□□ 0.78
UBFD1O14562 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.92■□□□□ 0.78
UBFD1O14562 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.92■□□□□ 0.78
UBFD1O14562 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.92■□□□□ 0.78
UBFD1O14562 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBFD1O14562 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBFD1O14562 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
UBFD1O14562 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.92■□□□□ 0.78
UBFD1O14562 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBFD1O14562 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
UBFD1O14562 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
UBFD1O14562 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBFD1O14562 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBFD1O14562 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBFD1O14562 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBFD1O14562 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBFD1O14562 LINC02228-203ENST00000641970 1355 ntBASIC19.91■□□□□ 0.78
UBFD1O14562 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
UBFD1O14562 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBFD1O14562 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBFD1O14562 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBFD1O14562 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBFD1O14562 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
UBFD1O14562 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBFD1O14562 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBFD1O14562 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBFD1O14562 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBFD1O14562 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBFD1O14562 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBFD1O14562 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.9■□□□□ 0.78
UBFD1O14562 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
UBFD1O14562 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
UBFD1O14562 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UBFD1O14562 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.89■□□□□ 0.77
UBFD1O14562 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
UBFD1O14562 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
UBFD1O14562 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
UBFD1O14562 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.89■□□□□ 0.77
UBFD1O14562 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
UBFD1O14562 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBFD1O14562 AC116050.2-201ENST00000612102 1779 ntBASIC19.89■□□□□ 0.77
UBFD1O14562 MIR2861-201ENST00000636310 90 ntBASIC19.89■□□□□ 0.77
UBFD1O14562 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBFD1O14562 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBFD1O14562 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBFD1O14562 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBFD1O14562 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.88■□□□□ 0.77
UBFD1O14562 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBFD1O14562 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.88■□□□□ 0.77
UBFD1O14562 AC007952.6-201ENST00000573168 2673 ntBASIC19.88■□□□□ 0.77
UBFD1O14562 AC003957.1-201ENST00000625108 2673 ntBASIC19.88■□□□□ 0.77
UBFD1O14562 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
UBFD1O14562 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.88■□□□□ 0.77
UBFD1O14562 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBFD1O14562 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBFD1O14562 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.88■□□□□ 0.77
UBFD1O14562 DUX4L2-201ENST00000561772 1275 ntBASIC19.88■□□□□ 0.77
UBFD1O14562 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.88■□□□□ 0.77
UBFD1O14562 AP001160.3-201ENST00000601484 763 ntBASIC19.88■□□□□ 0.77
UBFD1O14562 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.88■□□□□ 0.77
UBFD1O14562 DUX4L6-201ENST00000626483 1275 ntBASIC19.88■□□□□ 0.77
UBFD1O14562 DUX4L1-201ENST00000627662 1275 ntBASIC19.88■□□□□ 0.77
UBFD1O14562 DUX4L8-201ENST00000629013 1275 ntBASIC19.88■□□□□ 0.77
UBFD1O14562 DUX4L3-201ENST00000630187 1275 ntBASIC19.88■□□□□ 0.77
UBFD1O14562 DUX4L7-201ENST00000630678 1275 ntBASIC19.88■□□□□ 0.77
UBFD1O14562 DUX4L5-201ENST00000630834 1275 ntBASIC19.88■□□□□ 0.77
UBFD1O14562 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBFD1O14562 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBFD1O14562 TCF3P1-201ENST00000423021 1937 ntBASIC19.88■□□□□ 0.77
UBFD1O14562 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBFD1O14562 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.87■□□□□ 0.77
UBFD1O14562 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
UBFD1O14562 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBFD1O14562 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
UBFD1O14562 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.87■□□□□ 0.77
UBFD1O14562 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.87■□□□□ 0.77
UBFD1O14562 AC120498.10-201ENST00000621827 505 ntBASIC19.87■□□□□ 0.77
UBFD1O14562 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBFD1O14562 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBFD1O14562 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.87■□□□□ 0.77
UBFD1O14562 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UBFD1O14562 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.87■□□□□ 0.77
UBFD1O14562 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.87■□□□□ 0.77
UBFD1O14562 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
UBFD1O14562 SMG8-203ENST00000578922 2178 ntBASIC19.87■□□□□ 0.77
UBFD1O14562 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms