Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
NDUFA4O00483 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC15.74■□□□□ 0.11
NDUFA4O00483 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDUFA4O00483 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDUFA4O00483 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDUFA4O00483 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NDUFA4O00483 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NDUFA4O00483 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDUFA4O00483 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.74■□□□□ 0.11
NDUFA4O00483 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDUFA4O00483 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDUFA4O00483 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDUFA4O00483 METTL26-203ENST00000397664 604 ntTSL 2 BASIC15.74■□□□□ 0.11
NDUFA4O00483 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC15.74■□□□□ 0.11
NDUFA4O00483 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.74■□□□□ 0.11
NDUFA4O00483 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15.74■□□□□ 0.11
NDUFA4O00483 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NDUFA4O00483 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.74■□□□□ 0.11
NDUFA4O00483 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NDUFA4O00483 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
NDUFA4O00483 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDUFA4O00483 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDUFA4O00483 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDUFA4O00483 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDUFA4O00483 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
NDUFA4O00483 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NDUFA4O00483 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDUFA4O00483 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDUFA4O00483 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NDUFA4O00483 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NDUFA4O00483 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NDUFA4O00483 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NDUFA4O00483 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NDUFA4O00483 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NDUFA4O00483 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC15.73■□□□□ 0.11
NDUFA4O00483 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NDUFA4O00483 UQCRFS1P1-201ENST00000435169 820 ntBASIC15.73■□□□□ 0.11
NDUFA4O00483 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC15.73■□□□□ 0.11
NDUFA4O00483 DUX4L16-201ENST00000555130 1264 ntBASIC15.73■□□□□ 0.11
NDUFA4O00483 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC15.73■□□□□ 0.11
NDUFA4O00483 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NDUFA4O00483 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NDUFA4O00483 AC231657.2-201ENST00000624556 255 ntBASIC15.73■□□□□ 0.11
NDUFA4O00483 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.73■□□□□ 0.11
NDUFA4O00483 MIR2861-201ENST00000636310 90 ntBASIC15.73■□□□□ 0.11
NDUFA4O00483 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NDUFA4O00483 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NDUFA4O00483 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NDUFA4O00483 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
NDUFA4O00483 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NDUFA4O00483 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NDUFA4O00483 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC15.73■□□□□ 0.11
NDUFA4O00483 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NDUFA4O00483 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC15.73■□□□□ 0.11
NDUFA4O00483 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA4O00483 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC15.72■□□□□ 0.11
NDUFA4O00483 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC15.72■□□□□ 0.11
NDUFA4O00483 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC15.72■□□□□ 0.11
NDUFA4O00483 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.72■□□□□ 0.11
NDUFA4O00483 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.72■□□□□ 0.11
NDUFA4O00483 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA4O00483 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC15.72■□□□□ 0.11
NDUFA4O00483 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC15.72■□□□□ 0.11
NDUFA4O00483 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA4O00483 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA4O00483 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA4O00483 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA4O00483 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA4O00483 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA4O00483 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC15.72■□□□□ 0.11
NDUFA4O00483 PGM5P4-201ENST00000421970 445 ntBASIC15.72■□□□□ 0.11
NDUFA4O00483 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.72■□□□□ 0.11
NDUFA4O00483 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA4O00483 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC15.72■□□□□ 0.11
NDUFA4O00483 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.72■□□□□ 0.11
NDUFA4O00483 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.72■□□□□ 0.11
NDUFA4O00483 FEM1AP1-201ENST00000431297 1995 ntBASIC15.72■□□□□ 0.11
NDUFA4O00483 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA4O00483 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.72■□□□□ 0.11
NDUFA4O00483 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
NDUFA4O00483 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA4O00483 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NDUFA4O00483 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
NDUFA4O00483 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
NDUFA4O00483 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
NDUFA4O00483 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NDUFA4O00483 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC15.71■□□□□ 0.11
NDUFA4O00483 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NDUFA4O00483 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.71■□□□□ 0.11
NDUFA4O00483 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NDUFA4O00483 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.71■□□□□ 0.11
NDUFA4O00483 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NDUFA4O00483 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC15.71■□□□□ 0.11
NDUFA4O00483 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC15.71■□□□□ 0.11
NDUFA4O00483 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NDUFA4O00483 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NDUFA4O00483 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NDUFA4O00483 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NDUFA4O00483 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NDUFA4O00483 BET1L-204ENST00000410108 637 ntTSL 3 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms