Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.57■□□□□ 0.72
RTCAO00442 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RTCAO00442 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.57■□□□□ 0.72
RTCAO00442 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.57■□□□□ 0.72
RTCAO00442 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTCAO00442 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.57■□□□□ 0.72
RTCAO00442 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.57■□□□□ 0.72
RTCAO00442 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.57■□□□□ 0.72
RTCAO00442 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTCAO00442 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTCAO00442 AC007322.3-201ENST00000426526 701 ntBASIC19.57■□□□□ 0.72
RTCAO00442 CNN2P6-201ENST00000439038 900 ntBASIC19.57■□□□□ 0.72
RTCAO00442 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.57■□□□□ 0.72
RTCAO00442 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.57■□□□□ 0.72
RTCAO00442 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.57■□□□□ 0.72
RTCAO00442 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.57■□□□□ 0.72
RTCAO00442 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.57■□□□□ 0.72
RTCAO00442 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.57■□□□□ 0.72
RTCAO00442 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.57■□□□□ 0.72
RTCAO00442 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
RTCAO00442 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTCAO00442 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTCAO00442 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RTCAO00442 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTCAO00442 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTCAO00442 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTCAO00442 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
RTCAO00442 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RTCAO00442 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTCAO00442 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RTCAO00442 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTCAO00442 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTCAO00442 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RTCAO00442 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RTCAO00442 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RTCAO00442 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTCAO00442 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.56■□□□□ 0.72
RTCAO00442 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.56■□□□□ 0.72
RTCAO00442 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.56■□□□□ 0.72
RTCAO00442 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RTCAO00442 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RTCAO00442 AC013268.1-206ENST00000638368 961 ntBASIC19.56■□□□□ 0.72
RTCAO00442 AC112229.1-201ENST00000639295 961 ntBASIC19.56■□□□□ 0.72
RTCAO00442 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RTCAO00442 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTCAO00442 AC092667.1-201ENST00000434301 2586 ntBASIC19.56■□□□□ 0.72
RTCAO00442 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RTCAO00442 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTCAO00442 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTCAO00442 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RTCAO00442 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.55■□□□□ 0.72
RTCAO00442 FEM1AP1-201ENST00000431297 1995 ntBASIC19.55■□□□□ 0.72
RTCAO00442 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
RTCAO00442 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RTCAO00442 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTCAO00442 AC027702.1-201ENST00000563810 1770 ntBASIC19.55■□□□□ 0.72
RTCAO00442 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTCAO00442 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RTCAO00442 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RTCAO00442 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.55■□□□□ 0.72
RTCAO00442 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTCAO00442 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTCAO00442 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RTCAO00442 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
RTCAO00442 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.55■□□□□ 0.72
RTCAO00442 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RTCAO00442 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.55■□□□□ 0.72
RTCAO00442 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.55■□□□□ 0.72
RTCAO00442 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RTCAO00442 AL121603.2-201ENST00000557373 2117 ntBASIC19.55■□□□□ 0.72
RTCAO00442 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RTCAO00442 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTCAO00442 AC073314.1-201ENST00000568729 2216 ntBASIC19.55■□□□□ 0.72
RTCAO00442 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTCAO00442 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTCAO00442 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.54■□□□□ 0.72
RTCAO00442 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RTCAO00442 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RTCAO00442 LINC01006-201ENST00000333319 2292 ntBASIC19.54■□□□□ 0.72
RTCAO00442 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
RTCAO00442 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RTCAO00442 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RTCAO00442 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RTCAO00442 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTCAO00442 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.54■□□□□ 0.72
RTCAO00442 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.54■□□□□ 0.72
RTCAO00442 AL591742.1-201ENST00000604433 565 ntBASIC19.54■□□□□ 0.72
RTCAO00442 AL137784.2-201ENST00000607332 1000 ntBASIC19.54■□□□□ 0.72
RTCAO00442 AC016405.3-201ENST00000607710 860 ntBASIC19.54■□□□□ 0.72
RTCAO00442 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.54■□□□□ 0.72
RTCAO00442 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RTCAO00442 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RTCAO00442 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTCAO00442 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.54■□□□□ 0.72
RTCAO00442 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RTCAO00442 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.54■□□□□ 0.72
RTCAO00442 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTCAO00442 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTCAO00442 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTCAO00442 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms