Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CDC7O00311 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.14■□□□□ 0.81
CDC7O00311 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDC7O00311 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.14■□□□□ 0.81
CDC7O00311 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDC7O00311 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDC7O00311 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CDC7O00311 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CDC7O00311 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDC7O00311 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDC7O00311 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.14■□□□□ 0.81
CDC7O00311 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDC7O00311 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.14■□□□□ 0.81
CDC7O00311 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDC7O00311 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.14■□□□□ 0.81
CDC7O00311 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.14■□□□□ 0.81
CDC7O00311 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.14■□□□□ 0.81
CDC7O00311 AC243732.1-201ENST00000612648 864 ntBASIC20.14■□□□□ 0.81
CDC7O00311 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CDC7O00311 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDC7O00311 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.14■□□□□ 0.81
CDC7O00311 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.14■□□□□ 0.81
CDC7O00311 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDC7O00311 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDC7O00311 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDC7O00311 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.13■□□□□ 0.81
CDC7O00311 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDC7O00311 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDC7O00311 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDC7O00311 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDC7O00311 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDC7O00311 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CDC7O00311 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDC7O00311 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDC7O00311 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDC7O00311 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.13■□□□□ 0.81
CDC7O00311 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.13■□□□□ 0.81
CDC7O00311 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.13■□□□□ 0.81
CDC7O00311 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.13■□□□□ 0.81
CDC7O00311 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDC7O00311 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDC7O00311 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDC7O00311 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDC7O00311 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDC7O00311 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDC7O00311 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CDC7O00311 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.13■□□□□ 0.81
CDC7O00311 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDC7O00311 AL391422.3-201ENST00000603791 2761 ntBASIC20.12■□□□□ 0.81
CDC7O00311 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDC7O00311 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDC7O00311 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDC7O00311 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.12■□□□□ 0.81
CDC7O00311 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDC7O00311 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDC7O00311 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.12■□□□□ 0.81
CDC7O00311 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDC7O00311 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.12■□□□□ 0.81
CDC7O00311 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CDC7O00311 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.12■□□□□ 0.81
CDC7O00311 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.12■□□□□ 0.81
CDC7O00311 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.12■□□□□ 0.81
CDC7O00311 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.12■□□□□ 0.81
CDC7O00311 MYCNOS-205ENST00000641950 531 ntBASIC20.12■□□□□ 0.81
CDC7O00311 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
CDC7O00311 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDC7O00311 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.12■□□□□ 0.81
CDC7O00311 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.12■□□□□ 0.81
CDC7O00311 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDC7O00311 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDC7O00311 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
CDC7O00311 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDC7O00311 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDC7O00311 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDC7O00311 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.11■□□□□ 0.81
CDC7O00311 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.11■□□□□ 0.81
CDC7O00311 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDC7O00311 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDC7O00311 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDC7O00311 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDC7O00311 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDC7O00311 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.11■□□□□ 0.81
CDC7O00311 AL512408.1-201ENST00000569378 2000 ntBASIC20.1■□□□□ 0.81
CDC7O00311 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDC7O00311 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDC7O00311 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDC7O00311 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CDC7O00311 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDC7O00311 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.1■□□□□ 0.81
CDC7O00311 AC026271.2-201ENST00000428091 497 ntBASIC20.1■□□□□ 0.81
CDC7O00311 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDC7O00311 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.1■□□□□ 0.81
CDC7O00311 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.1■□□□□ 0.81
CDC7O00311 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDC7O00311 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.1■□□□□ 0.81
CDC7O00311 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.1■□□□□ 0.81
CDC7O00311 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.1■□□□□ 0.81
CDC7O00311 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.1■□□□□ 0.81
CDC7O00311 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CDC7O00311 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms