Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF11BO00300 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF11BO00300 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF11BO00300 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF11BO00300 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF11BO00300 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TNFRSF11BO00300 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.95■□□□□ 0.62
TNFRSF11BO00300 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.95■□□□□ 0.62
TNFRSF11BO00300 AC092720.2-201ENST00000602388 1665 ntBASIC18.95■□□□□ 0.62
TNFRSF11BO00300 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.95■□□□□ 0.62
TNFRSF11BO00300 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF11BO00300 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF11BO00300 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF11BO00300 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF11BO00300 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF11BO00300 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF11BO00300 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.95■□□□□ 0.62
TNFRSF11BO00300 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.95■□□□□ 0.62
TNFRSF11BO00300 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF11BO00300 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.95■□□□□ 0.62
TNFRSF11BO00300 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF11BO00300 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF11BO00300 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF11BO00300 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF11BO00300 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TNFRSF11BO00300 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF11BO00300 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF11BO00300 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.94■□□□□ 0.62
TNFRSF11BO00300 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF11BO00300 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF11BO00300 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF11BO00300 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF11BO00300 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF11BO00300 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.94■□□□□ 0.62
TNFRSF11BO00300 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.94■□□□□ 0.62
TNFRSF11BO00300 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TNFRSF11BO00300 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF11BO00300 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF11BO00300 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF11BO00300 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.94■□□□□ 0.62
TNFRSF11BO00300 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.94■□□□□ 0.62
TNFRSF11BO00300 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF11BO00300 AC061975.6-201ENST00000579045 1553 ntBASIC18.93■□□□□ 0.62
TNFRSF11BO00300 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFRSF11BO00300 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFRSF11BO00300 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.93■□□□□ 0.62
TNFRSF11BO00300 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFRSF11BO00300 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TNFRSF11BO00300 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
TNFRSF11BO00300 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TNFRSF11BO00300 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.93■□□□□ 0.62
TNFRSF11BO00300 AL136116.3-201ENST00000402907 1138 ntBASIC18.93■□□□□ 0.62
TNFRSF11BO00300 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.93■□□□□ 0.62
TNFRSF11BO00300 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.93■□□□□ 0.62
TNFRSF11BO00300 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.93■□□□□ 0.62
TNFRSF11BO00300 AC053503.5-201ENST00000601508 636 ntBASIC18.93■□□□□ 0.62
TNFRSF11BO00300 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TNFRSF11BO00300 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TNFRSF11BO00300 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFRSF11BO00300 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFRSF11BO00300 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.93■□□□□ 0.62
TNFRSF11BO00300 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.93■□□□□ 0.62
TNFRSF11BO00300 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TNFRSF11BO00300 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
TNFRSF11BO00300 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.92■□□□□ 0.62
TNFRSF11BO00300 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF11BO00300 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF11BO00300 RNF165-205ENST00000588679 2904 ntBASIC18.92■□□□□ 0.62
TNFRSF11BO00300 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF11BO00300 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF11BO00300 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF11BO00300 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF11BO00300 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF11BO00300 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF11BO00300 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF11BO00300 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TNFRSF11BO00300 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF11BO00300 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.92■□□□□ 0.62
TNFRSF11BO00300 EEF1DP3-203ENST00000566025 782 ntBASIC18.92■□□□□ 0.62
TNFRSF11BO00300 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF11BO00300 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TNFRSF11BO00300 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF11BO00300 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF11BO00300 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF11BO00300 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF11BO00300 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TNFRSF11BO00300 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF11BO00300 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF11BO00300 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF11BO00300 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF11BO00300 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF11BO00300 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.91■□□□□ 0.62
TNFRSF11BO00300 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF11BO00300 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.91■□□□□ 0.62
TNFRSF11BO00300 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.91■□□□□ 0.62
TNFRSF11BO00300 AC024257.2-201ENST00000549699 147 ntBASIC18.91■□□□□ 0.62
TNFRSF11BO00300 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF11BO00300 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TNFRSF11BO00300 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.91■□□□□ 0.62
TNFRSF11BO00300 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms