Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLIC1O00299 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLIC1O00299 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLIC1O00299 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.33■□□□□ 0.69
CLIC1O00299 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLIC1O00299 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.33■□□□□ 0.69
CLIC1O00299 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CLIC1O00299 AC092720.2-201ENST00000602388 1665 ntBASIC19.33■□□□□ 0.69
CLIC1O00299 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLIC1O00299 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLIC1O00299 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CLIC1O00299 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CLIC1O00299 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.69
CLIC1O00299 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLIC1O00299 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.33■□□□□ 0.68
CLIC1O00299 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.33■□□□□ 0.68
CLIC1O00299 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.33■□□□□ 0.68
CLIC1O00299 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLIC1O00299 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.33■□□□□ 0.68
CLIC1O00299 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.33■□□□□ 0.68
CLIC1O00299 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLIC1O00299 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.33■□□□□ 0.68
CLIC1O00299 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CLIC1O00299 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLIC1O00299 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLIC1O00299 KRT16P2-201ENST00000414673 1423 ntBASIC19.33■□□□□ 0.68
CLIC1O00299 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLIC1O00299 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CLIC1O00299 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLIC1O00299 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC1O00299 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC1O00299 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC1O00299 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.32■□□□□ 0.68
CLIC1O00299 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.32■□□□□ 0.68
CLIC1O00299 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC1O00299 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC1O00299 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CLIC1O00299 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CLIC1O00299 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC1O00299 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC1O00299 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC1O00299 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC1O00299 AC245052.3-201ENST00000450182 901 ntBASIC19.32■□□□□ 0.68
CLIC1O00299 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC1O00299 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.32■□□□□ 0.68
CLIC1O00299 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC1O00299 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC1O00299 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC1O00299 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC1O00299 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CLIC1O00299 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLIC1O00299 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLIC1O00299 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLIC1O00299 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLIC1O00299 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLIC1O00299 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CLIC1O00299 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLIC1O00299 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CLIC1O00299 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLIC1O00299 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.31■□□□□ 0.68
CLIC1O00299 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.31■□□□□ 0.68
CLIC1O00299 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.31■□□□□ 0.68
CLIC1O00299 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.31■□□□□ 0.68
CLIC1O00299 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.31■□□□□ 0.68
CLIC1O00299 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLIC1O00299 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.31■□□□□ 0.68
CLIC1O00299 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLIC1O00299 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.31■□□□□ 0.68
CLIC1O00299 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CLIC1O00299 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.31■□□□□ 0.68
CLIC1O00299 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CLIC1O00299 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CLIC1O00299 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLIC1O00299 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLIC1O00299 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CLIC1O00299 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CLIC1O00299 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLIC1O00299 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.3■□□□□ 0.68
CLIC1O00299 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLIC1O00299 AL139246.5-201ENST00000606645 996 ntBASIC19.3■□□□□ 0.68
CLIC1O00299 AC120498.10-201ENST00000621827 505 ntBASIC19.3■□□□□ 0.68
CLIC1O00299 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.3■□□□□ 0.68
CLIC1O00299 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CLIC1O00299 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CLIC1O00299 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.3■□□□□ 0.68
CLIC1O00299 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
CLIC1O00299 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CLIC1O00299 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIC1O00299 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIC1O00299 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CLIC1O00299 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.29■□□□□ 0.68
CLIC1O00299 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLIC1O00299 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CLIC1O00299 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLIC1O00299 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIC1O00299 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.29■□□□□ 0.68
CLIC1O00299 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLIC1O00299 AC142381.2-201ENST00000566120 298 ntBASIC19.29■□□□□ 0.68
CLIC1O00299 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.29■□□□□ 0.68
CLIC1O00299 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms