Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 AC100791.3-201ENST00000617619 330 ntBASIC20.43■□□□□ 0.86
H3BM21 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H3BM21 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
H3BM21 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
H3BM21 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H3BM21 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H3BM21 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.43■□□□□ 0.86
H3BM21 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.43■□□□□ 0.86
H3BM21 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
H3BM21 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
H3BM21 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
H3BM21 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
H3BM21 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.42■□□□□ 0.86
H3BM21 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
H3BM21 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
H3BM21 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
H3BM21 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
H3BM21 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
H3BM21 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
H3BM21 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.42■□□□□ 0.86
H3BM21 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
H3BM21 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.42■□□□□ 0.86
H3BM21 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.42■□□□□ 0.86
H3BM21 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
H3BM21 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
H3BM21 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.42■□□□□ 0.86
H3BM21 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
H3BM21 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
H3BM21 AC007375.3-201ENST00000600936 2314 ntBASIC20.42■□□□□ 0.86
H3BM21 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
H3BM21 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
H3BM21 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
H3BM21 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
H3BM21 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
H3BM21 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
H3BM21 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
H3BM21 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
H3BM21 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
H3BM21 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.41■□□□□ 0.86
H3BM21 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
H3BM21 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.41■□□□□ 0.86
H3BM21 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
H3BM21 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.41■□□□□ 0.86
H3BM21 AC066615.1-201ENST00000640911 628 ntBASIC20.41■□□□□ 0.86
H3BM21 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.41■□□□□ 0.86
H3BM21 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
H3BM21 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
H3BM21 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
H3BM21 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
H3BM21 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
H3BM21 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
H3BM21 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.4■□□□□ 0.86
H3BM21 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
H3BM21 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
H3BM21 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
H3BM21 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
H3BM21 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.4■□□□□ 0.86
H3BM21 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.4■□□□□ 0.86
H3BM21 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.4■□□□□ 0.86
H3BM21 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
H3BM21 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.4■□□□□ 0.86
H3BM21 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.4■□□□□ 0.86
H3BM21 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
H3BM21 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.4■□□□□ 0.86
H3BM21 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.4■□□□□ 0.86
H3BM21 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
H3BM21 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.4■□□□□ 0.86
H3BM21 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.39■□□□□ 0.86
H3BM21 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
H3BM21 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.39■□□□□ 0.86
H3BM21 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
H3BM21 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.39■□□□□ 0.85
H3BM21 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.39■□□□□ 0.85
H3BM21 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
H3BM21 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.39■□□□□ 0.85
H3BM21 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.39■□□□□ 0.85
H3BM21 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.39■□□□□ 0.85
H3BM21 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
H3BM21 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
H3BM21 CYP2T3P-201ENST00000601990 817 ntBASIC20.39■□□□□ 0.85
H3BM21 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
H3BM21 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
H3BM21 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
H3BM21 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
H3BM21 AF106564.1-201ENST00000607058 2553 ntBASIC20.38■□□□□ 0.85
H3BM21 ESRRAP1-201ENST00000400596 1257 ntBASIC20.38■□□□□ 0.85
H3BM21 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
H3BM21 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.38■□□□□ 0.85
H3BM21 AC007322.3-201ENST00000426526 701 ntBASIC20.38■□□□□ 0.85
H3BM21 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.38■□□□□ 0.85
H3BM21 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.38■□□□□ 0.85
H3BM21 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.38■□□□□ 0.85
H3BM21 AL589743.5-201ENST00000616611 1050 ntBASIC20.38■□□□□ 0.85
H3BM21 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.38■□□□□ 0.85
H3BM21 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.38■□□□□ 0.85
H3BM21 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
H3BM21 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.38■□□□□ 0.85
H3BM21 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
H3BM21 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
H3BM21 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms