Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF223E7ERA6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RNF223E7ERA6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF223E7ERA6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RNF223E7ERA6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF223E7ERA6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF223E7ERA6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RNF223E7ERA6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF223E7ERA6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
RNF223E7ERA6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RNF223E7ERA6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF223E7ERA6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF223E7ERA6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF223E7ERA6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF223E7ERA6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.07■□□□□ 0.32
RNF223E7ERA6 MIR4785-201ENST00000585005 73 ntBASIC17.07■□□□□ 0.32
RNF223E7ERA6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.07■□□□□ 0.32
RNF223E7ERA6 AC120498.8-201ENST00000614275 531 ntBASIC17.07■□□□□ 0.32
RNF223E7ERA6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF223E7ERA6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF223E7ERA6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF223E7ERA6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RNF223E7ERA6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF223E7ERA6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF223E7ERA6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF223E7ERA6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF223E7ERA6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF223E7ERA6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RNF223E7ERA6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF223E7ERA6 AL135905.2-201ENST00000584934 1404 ntBASIC17.06■□□□□ 0.32
RNF223E7ERA6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
RNF223E7ERA6 FAM99A-202ENST00000538190 1989 ntBASIC17.06■□□□□ 0.32
RNF223E7ERA6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF223E7ERA6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF223E7ERA6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF223E7ERA6 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF223E7ERA6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF223E7ERA6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RNF223E7ERA6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RNF223E7ERA6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RNF223E7ERA6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF223E7ERA6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RNF223E7ERA6 AC133681.1-201ENST00000465482 601 ntBASIC17.06■□□□□ 0.32
RNF223E7ERA6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF223E7ERA6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF223E7ERA6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF223E7ERA6 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC17.06■□□□□ 0.32
RNF223E7ERA6 AC110285.5-201ENST00000611501 352 ntBASIC17.06■□□□□ 0.32
RNF223E7ERA6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF223E7ERA6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF223E7ERA6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF223E7ERA6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF223E7ERA6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RNF223E7ERA6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF223E7ERA6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RNF223E7ERA6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF223E7ERA6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF223E7ERA6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RNF223E7ERA6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF223E7ERA6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF223E7ERA6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF223E7ERA6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF223E7ERA6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF223E7ERA6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RNF223E7ERA6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF223E7ERA6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.05■□□□□ 0.32
RNF223E7ERA6 TSPY15P-201ENST00000457163 923 ntBASIC17.05■□□□□ 0.32
RNF223E7ERA6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RNF223E7ERA6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF223E7ERA6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF223E7ERA6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF223E7ERA6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF223E7ERA6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.05■□□□□ 0.32
RNF223E7ERA6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF223E7ERA6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RNF223E7ERA6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
RNF223E7ERA6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF223E7ERA6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF223E7ERA6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF223E7ERA6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
RNF223E7ERA6 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF223E7ERA6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF223E7ERA6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF223E7ERA6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF223E7ERA6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF223E7ERA6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
RNF223E7ERA6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF223E7ERA6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF223E7ERA6 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF223E7ERA6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF223E7ERA6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.04■□□□□ 0.32
RNF223E7ERA6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RNF223E7ERA6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF223E7ERA6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.04■□□□□ 0.32
RNF223E7ERA6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF223E7ERA6 AC087499.1-201ENST00000418141 1075 ntBASIC17.04■□□□□ 0.32
RNF223E7ERA6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF223E7ERA6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.04■□□□□ 0.32
RNF223E7ERA6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF223E7ERA6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms