Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 AC120498.10-201ENST00000621827 505 ntBASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 RARRES2P11-201ENST00000635158 484 ntBASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 LINC02228-203ENST00000641970 1355 ntBASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CPSF4LA6NMK7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.89■□□□□ 0.61
CPSF4LA6NMK7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPSF4LA6NMK7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.89■□□□□ 0.61
CPSF4LA6NMK7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPSF4LA6NMK7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.89■□□□□ 0.61
CPSF4LA6NMK7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
CPSF4LA6NMK7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPSF4LA6NMK7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.89■□□□□ 0.61
CPSF4LA6NMK7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPSF4LA6NMK7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPSF4LA6NMK7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPSF4LA6NMK7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPSF4LA6NMK7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPSF4LA6NMK7 MIR638-201ENST00000385237 100 ntBASIC18.89■□□□□ 0.61
CPSF4LA6NMK7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPSF4LA6NMK7 AC245052.3-201ENST00000450182 901 ntBASIC18.89■□□□□ 0.61
CPSF4LA6NMK7 AC010141.2-201ENST00000452426 721 ntBASIC18.89■□□□□ 0.61
CPSF4LA6NMK7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.89■□□□□ 0.61
CPSF4LA6NMK7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPSF4LA6NMK7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CPSF4LA6NMK7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPSF4LA6NMK7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPSF4LA6NMK7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
CPSF4LA6NMK7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.89■□□□□ 0.61
CPSF4LA6NMK7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPSF4LA6NMK7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPSF4LA6NMK7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.88■□□□□ 0.61
CPSF4LA6NMK7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.88■□□□□ 0.61
CPSF4LA6NMK7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CPSF4LA6NMK7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPSF4LA6NMK7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPSF4LA6NMK7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPSF4LA6NMK7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPSF4LA6NMK7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.88■□□□□ 0.61
CPSF4LA6NMK7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.88■□□□□ 0.61
CPSF4LA6NMK7 AC104187.1-201ENST00000607510 612 ntBASIC18.88■□□□□ 0.61
CPSF4LA6NMK7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPSF4LA6NMK7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPSF4LA6NMK7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.88■□□□□ 0.61
CPSF4LA6NMK7 KRT16P2-201ENST00000414673 1423 ntBASIC18.88■□□□□ 0.61
CPSF4LA6NMK7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPSF4LA6NMK7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPSF4LA6NMK7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPSF4LA6NMK7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPSF4LA6NMK7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.87■□□□□ 0.61
CPSF4LA6NMK7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPSF4LA6NMK7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPSF4LA6NMK7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPSF4LA6NMK7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPSF4LA6NMK7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.87■□□□□ 0.61
CPSF4LA6NMK7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CPSF4LA6NMK7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPSF4LA6NMK7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.87■□□□□ 0.61
CPSF4LA6NMK7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.87■□□□□ 0.61
CPSF4LA6NMK7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.87■□□□□ 0.61
CPSF4LA6NMK7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.87■□□□□ 0.61
CPSF4LA6NMK7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPSF4LA6NMK7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPSF4LA6NMK7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.86■□□□□ 0.61
CPSF4LA6NMK7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.86■□□□□ 0.61
CPSF4LA6NMK7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPSF4LA6NMK7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CPSF4LA6NMK7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPSF4LA6NMK7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPSF4LA6NMK7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPSF4LA6NMK7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPSF4LA6NMK7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CPSF4LA6NMK7 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.86■□□□□ 0.61
CPSF4LA6NMK7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.86■□□□□ 0.61
CPSF4LA6NMK7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPSF4LA6NMK7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CPSF4LA6NMK7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPSF4LA6NMK7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms