Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.2■□□□□ 0.18
LINC01548A6NM66 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LINC01548A6NM66 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01548A6NM66 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01548A6NM66 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.2■□□□□ 0.18
LINC01548A6NM66 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01548A6NM66 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01548A6NM66 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01548A6NM66 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC01548A6NM66 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC01548A6NM66 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01548A6NM66 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.2■□□□□ 0.18
LINC01548A6NM66 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01548A6NM66 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.2■□□□□ 0.18
LINC01548A6NM66 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01548A6NM66 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
LINC01548A6NM66 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LINC01548A6NM66 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01548A6NM66 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
LINC01548A6NM66 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
LINC01548A6NM66 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC01548A6NM66 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.19■□□□□ 0.18
LINC01548A6NM66 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.19■□□□□ 0.18
LINC01548A6NM66 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.19■□□□□ 0.18
LINC01548A6NM66 KRT17P1-201ENST00000399211 1546 ntBASIC16.19■□□□□ 0.18
LINC01548A6NM66 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01548A6NM66 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
LINC01548A6NM66 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.19■□□□□ 0.18
LINC01548A6NM66 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01548A6NM66 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01548A6NM66 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01548A6NM66 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01548A6NM66 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01548A6NM66 CYP21A1P-202ENST00000354927 1481 ntBASIC16.19■□□□□ 0.18
LINC01548A6NM66 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.19■□□□□ 0.18
LINC01548A6NM66 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.19■□□□□ 0.18
LINC01548A6NM66 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.19■□□□□ 0.18
LINC01548A6NM66 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01548A6NM66 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01548A6NM66 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.19■□□□□ 0.18
LINC01548A6NM66 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LINC01548A6NM66 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.19■□□□□ 0.18
LINC01548A6NM66 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.19■□□□□ 0.18
LINC01548A6NM66 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.19■□□□□ 0.18
LINC01548A6NM66 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.19■□□□□ 0.18
LINC01548A6NM66 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.19■□□□□ 0.18
LINC01548A6NM66 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01548A6NM66 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01548A6NM66 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01548A6NM66 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01548A6NM66 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01548A6NM66 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01548A6NM66 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01548A6NM66 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01548A6NM66 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01548A6NM66 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01548A6NM66 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01548A6NM66 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01548A6NM66 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01548A6NM66 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01548A6NM66 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.18■□□□□ 0.18
LINC01548A6NM66 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.18■□□□□ 0.18
LINC01548A6NM66 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01548A6NM66 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01548A6NM66 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01548A6NM66 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LINC01548A6NM66 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.18■□□□□ 0.18
LINC01548A6NM66 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01548A6NM66 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
LINC01548A6NM66 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01548A6NM66 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.18■□□□□ 0.18
LINC01548A6NM66 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01548A6NM66 AC142086.2-201ENST00000569753 217 ntBASIC16.18■□□□□ 0.18
LINC01548A6NM66 CYP2T3P-201ENST00000601990 817 ntBASIC16.18■□□□□ 0.18
LINC01548A6NM66 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.18■□□□□ 0.18
LINC01548A6NM66 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01548A6NM66 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01548A6NM66 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.18■□□□□ 0.18
LINC01548A6NM66 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.18■□□□□ 0.18
LINC01548A6NM66 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LINC01548A6NM66 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
LINC01548A6NM66 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
LINC01548A6NM66 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01548A6NM66 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.17■□□□□ 0.18
LINC01548A6NM66 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01548A6NM66 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.17■□□□□ 0.18
LINC01548A6NM66 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.17■□□□□ 0.18
LINC01548A6NM66 MCRIP2P1-201ENST00000394346 511 ntBASIC16.17■□□□□ 0.18
LINC01548A6NM66 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.17■□□□□ 0.18
LINC01548A6NM66 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.17■□□□□ 0.18
LINC01548A6NM66 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.17■□□□□ 0.18
LINC01548A6NM66 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.17■□□□□ 0.18
LINC01548A6NM66 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.17■□□□□ 0.18
LINC01548A6NM66 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.17■□□□□ 0.18
LINC01548A6NM66 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.17■□□□□ 0.18
LINC01548A6NM66 AC100791.3-201ENST00000617619 330 ntBASIC16.17■□□□□ 0.18
LINC01548A6NM66 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01548A6NM66 AC027702.1-201ENST00000563810 1770 ntBASIC16.17■□□□□ 0.18
LINC01548A6NM66 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.17■□□□□ 0.18
LINC01548A6NM66 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms