Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TBC1D3BA6NDS4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.9■□□□□ 0.94
TBC1D3BA6NDS4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TBC1D3BA6NDS4 AC087633.2-202ENST00000565166 1439 ntBASIC20.9■□□□□ 0.94
TBC1D3BA6NDS4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TBC1D3BA6NDS4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.9■□□□□ 0.94
TBC1D3BA6NDS4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TBC1D3BA6NDS4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.9■□□□□ 0.94
TBC1D3BA6NDS4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
TBC1D3BA6NDS4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.9■□□□□ 0.94
TBC1D3BA6NDS4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.9■□□□□ 0.94
TBC1D3BA6NDS4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TBC1D3BA6NDS4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TBC1D3BA6NDS4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TBC1D3BA6NDS4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TBC1D3BA6NDS4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TBC1D3BA6NDS4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
TBC1D3BA6NDS4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.89■□□□□ 0.94
TBC1D3BA6NDS4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TBC1D3BA6NDS4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TBC1D3BA6NDS4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TBC1D3BA6NDS4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TBC1D3BA6NDS4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
TBC1D3BA6NDS4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
TBC1D3BA6NDS4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TBC1D3BA6NDS4 UBE2SP1-201ENST00000450587 669 ntBASIC20.89■□□□□ 0.93
TBC1D3BA6NDS4 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.89■□□□□ 0.93
TBC1D3BA6NDS4 C1QBPP2-201ENST00000528754 825 ntBASIC20.89■□□□□ 0.93
TBC1D3BA6NDS4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.89■□□□□ 0.93
TBC1D3BA6NDS4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.89■□□□□ 0.93
TBC1D3BA6NDS4 AL359736.2-201ENST00000621992 437 ntBASIC20.89■□□□□ 0.93
TBC1D3BA6NDS4 FAM197Y4-202ENST00000622692 608 ntBASIC20.89■□□□□ 0.93
TBC1D3BA6NDS4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TBC1D3BA6NDS4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TBC1D3BA6NDS4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.89■□□□□ 0.93
TBC1D3BA6NDS4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
TBC1D3BA6NDS4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TBC1D3BA6NDS4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TBC1D3BA6NDS4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.89■□□□□ 0.93
TBC1D3BA6NDS4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.89■□□□□ 0.93
TBC1D3BA6NDS4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TBC1D3BA6NDS4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.88■□□□□ 0.93
TBC1D3BA6NDS4 AC133561.1-201ENST00000568600 2415 ntBASIC20.88■□□□□ 0.93
TBC1D3BA6NDS4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.88■□□□□ 0.93
TBC1D3BA6NDS4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TBC1D3BA6NDS4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.88■□□□□ 0.93
TBC1D3BA6NDS4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.88■□□□□ 0.93
TBC1D3BA6NDS4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TBC1D3BA6NDS4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.88■□□□□ 0.93
TBC1D3BA6NDS4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.88■□□□□ 0.93
TBC1D3BA6NDS4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.88■□□□□ 0.93
TBC1D3BA6NDS4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.88■□□□□ 0.93
TBC1D3BA6NDS4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TBC1D3BA6NDS4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.88■□□□□ 0.93
TBC1D3BA6NDS4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TBC1D3BA6NDS4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.88■□□□□ 0.93
TBC1D3BA6NDS4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TBC1D3BA6NDS4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TBC1D3BA6NDS4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TBC1D3BA6NDS4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TBC1D3BA6NDS4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.87■□□□□ 0.93
TBC1D3BA6NDS4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TBC1D3BA6NDS4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TBC1D3BA6NDS4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TBC1D3BA6NDS4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.87■□□□□ 0.93
TBC1D3BA6NDS4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TBC1D3BA6NDS4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.87■□□□□ 0.93
TBC1D3BA6NDS4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TBC1D3BA6NDS4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TBC1D3BA6NDS4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.87■□□□□ 0.93
TBC1D3BA6NDS4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TBC1D3BA6NDS4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TBC1D3BA6NDS4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TBC1D3BA6NDS4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.86■□□□□ 0.93
TBC1D3BA6NDS4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TBC1D3BA6NDS4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TBC1D3BA6NDS4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TBC1D3BA6NDS4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
TBC1D3BA6NDS4 RPPH1-201ENST00000516869 333 ntBASIC20.86■□□□□ 0.93
TBC1D3BA6NDS4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.86■□□□□ 0.93
TBC1D3BA6NDS4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.86■□□□□ 0.93
TBC1D3BA6NDS4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.86■□□□□ 0.93
TBC1D3BA6NDS4 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.86■□□□□ 0.93
TBC1D3BA6NDS4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.86■□□□□ 0.93
TBC1D3BA6NDS4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.86■□□□□ 0.93
TBC1D3BA6NDS4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TBC1D3BA6NDS4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TBC1D3BA6NDS4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TBC1D3BA6NDS4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.86■□□□□ 0.93
TBC1D3BA6NDS4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TBC1D3BA6NDS4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TBC1D3BA6NDS4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
TBC1D3BA6NDS4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TBC1D3BA6NDS4 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.85■□□□□ 0.93
TBC1D3BA6NDS4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TBC1D3BA6NDS4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TBC1D3BA6NDS4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TBC1D3BA6NDS4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TBC1D3BA6NDS4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TBC1D3BA6NDS4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms