Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV4-1A0A0J9YWV2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.82■□□□□ 0.6
TRBV4-1A0A0J9YWV2 AC092720.2-201ENST00000602388 1665 ntBASIC18.82■□□□□ 0.6
TRBV4-1A0A0J9YWV2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.82■□□□□ 0.6
TRBV4-1A0A0J9YWV2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV4-1A0A0J9YWV2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRBV4-1A0A0J9YWV2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.82■□□□□ 0.6
TRBV4-1A0A0J9YWV2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV4-1A0A0J9YWV2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TRBV4-1A0A0J9YWV2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV4-1A0A0J9YWV2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV4-1A0A0J9YWV2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV4-1A0A0J9YWV2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV4-1A0A0J9YWV2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV4-1A0A0J9YWV2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV4-1A0A0J9YWV2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRBV4-1A0A0J9YWV2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV4-1A0A0J9YWV2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV4-1A0A0J9YWV2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.81■□□□□ 0.6
TRBV4-1A0A0J9YWV2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV4-1A0A0J9YWV2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV4-1A0A0J9YWV2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.81■□□□□ 0.6
TRBV4-1A0A0J9YWV2 AC091305.1-201ENST00000479476 895 ntBASIC18.81■□□□□ 0.6
TRBV4-1A0A0J9YWV2 AL031432.3-201ENST00000607698 485 ntBASIC18.81■□□□□ 0.6
TRBV4-1A0A0J9YWV2 AC110285.6-201ENST00000617652 491 ntBASIC18.81■□□□□ 0.6
TRBV4-1A0A0J9YWV2 AL136967.2-201ENST00000623968 743 ntBASIC18.81■□□□□ 0.6
TRBV4-1A0A0J9YWV2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.81■□□□□ 0.6
TRBV4-1A0A0J9YWV2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV4-1A0A0J9YWV2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV4-1A0A0J9YWV2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
TRBV4-1A0A0J9YWV2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV4-1A0A0J9YWV2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV4-1A0A0J9YWV2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV4-1A0A0J9YWV2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV4-1A0A0J9YWV2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRBV4-1A0A0J9YWV2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV4-1A0A0J9YWV2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.8■□□□□ 0.6
TRBV4-1A0A0J9YWV2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV4-1A0A0J9YWV2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV4-1A0A0J9YWV2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV4-1A0A0J9YWV2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV4-1A0A0J9YWV2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV4-1A0A0J9YWV2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRBV4-1A0A0J9YWV2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
TRBV4-1A0A0J9YWV2 POU5F1P4-201ENST00000413175 1085 ntBASIC18.8■□□□□ 0.6
TRBV4-1A0A0J9YWV2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.8■□□□□ 0.6
TRBV4-1A0A0J9YWV2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.8■□□□□ 0.6
TRBV4-1A0A0J9YWV2 AC008175.2-201ENST00000612840 297 ntBASIC18.8■□□□□ 0.6
TRBV4-1A0A0J9YWV2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.8■□□□□ 0.6
TRBV4-1A0A0J9YWV2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.8■□□□□ 0.6
TRBV4-1A0A0J9YWV2 RARRES2P11-201ENST00000635158 484 ntBASIC18.8■□□□□ 0.6
TRBV4-1A0A0J9YWV2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV4-1A0A0J9YWV2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV4-1A0A0J9YWV2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.8■□□□□ 0.6
TRBV4-1A0A0J9YWV2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV4-1A0A0J9YWV2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV4-1A0A0J9YWV2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV4-1A0A0J9YWV2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV4-1A0A0J9YWV2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.79■□□□□ 0.6
TRBV4-1A0A0J9YWV2 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.79■□□□□ 0.6
TRBV4-1A0A0J9YWV2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV4-1A0A0J9YWV2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.79■□□□□ 0.6
TRBV4-1A0A0J9YWV2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV4-1A0A0J9YWV2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV4-1A0A0J9YWV2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
TRBV4-1A0A0J9YWV2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TRBV4-1A0A0J9YWV2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV4-1A0A0J9YWV2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRBV4-1A0A0J9YWV2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.78■□□□□ 0.6
TRBV4-1A0A0J9YWV2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV4-1A0A0J9YWV2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV4-1A0A0J9YWV2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV4-1A0A0J9YWV2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV4-1A0A0J9YWV2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.78■□□□□ 0.6
TRBV4-1A0A0J9YWV2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.78■□□□□ 0.6
TRBV4-1A0A0J9YWV2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.78■□□□□ 0.6
TRBV4-1A0A0J9YWV2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.78■□□□□ 0.6
TRBV4-1A0A0J9YWV2 AL354811.1-201ENST00000610286 706 ntBASIC18.78■□□□□ 0.6
TRBV4-1A0A0J9YWV2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
TRBV4-1A0A0J9YWV2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV4-1A0A0J9YWV2 TCF3P1-201ENST00000423021 1937 ntBASIC18.78■□□□□ 0.6
TRBV4-1A0A0J9YWV2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV4-1A0A0J9YWV2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV4-1A0A0J9YWV2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.78■□□□□ 0.6
TRBV4-1A0A0J9YWV2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV4-1A0A0J9YWV2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV4-1A0A0J9YWV2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV4-1A0A0J9YWV2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV4-1A0A0J9YWV2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV4-1A0A0J9YWV2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.77■□□□□ 0.6
TRBV4-1A0A0J9YWV2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV4-1A0A0J9YWV2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV4-1A0A0J9YWV2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.77■□□□□ 0.6
TRBV4-1A0A0J9YWV2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV4-1A0A0J9YWV2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV4-1A0A0J9YWV2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV4-1A0A0J9YWV2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.77■□□□□ 0.6
TRBV4-1A0A0J9YWV2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.77■□□□□ 0.6
TRBV4-1A0A0J9YWV2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TRBV4-1A0A0J9YWV2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms