Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
LOC102724428A0A0B4J2F2 RCN1P1-201ENST00000400413 996 ntBASIC26.37■■□□□ 1.81
LOC102724428A0A0B4J2F2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC26.37■■□□□ 1.81
LOC102724428A0A0B4J2F2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
LOC102724428A0A0B4J2F2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC26.37■■□□□ 1.81
LOC102724428A0A0B4J2F2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC26.37■■□□□ 1.81
LOC102724428A0A0B4J2F2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC26.37■■□□□ 1.81
LOC102724428A0A0B4J2F2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
LOC102724428A0A0B4J2F2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
LOC102724428A0A0B4J2F2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC26.37■■□□□ 1.81
LOC102724428A0A0B4J2F2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC26.37■■□□□ 1.81
LOC102724428A0A0B4J2F2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
LOC102724428A0A0B4J2F2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC26.36■■□□□ 1.81
LOC102724428A0A0B4J2F2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
LOC102724428A0A0B4J2F2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
LOC102724428A0A0B4J2F2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC26.36■■□□□ 1.81
LOC102724428A0A0B4J2F2 PENK-204ENST00000518770 863 ntTSL 2 BASIC26.36■■□□□ 1.81
LOC102724428A0A0B4J2F2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC26.36■■□□□ 1.81
LOC102724428A0A0B4J2F2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
LOC102724428A0A0B4J2F2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC26.36■■□□□ 1.81
LOC102724428A0A0B4J2F2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
LOC102724428A0A0B4J2F2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC26.36■■□□□ 1.81
LOC102724428A0A0B4J2F2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
LOC102724428A0A0B4J2F2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.36■■□□□ 1.81
LOC102724428A0A0B4J2F2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
LOC102724428A0A0B4J2F2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
LOC102724428A0A0B4J2F2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
LOC102724428A0A0B4J2F2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
LOC102724428A0A0B4J2F2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
LOC102724428A0A0B4J2F2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
LOC102724428A0A0B4J2F2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
LOC102724428A0A0B4J2F2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC26.35■■□□□ 1.81
LOC102724428A0A0B4J2F2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC26.35■■□□□ 1.81
LOC102724428A0A0B4J2F2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC26.35■■□□□ 1.81
LOC102724428A0A0B4J2F2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC26.35■■□□□ 1.81
LOC102724428A0A0B4J2F2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
LOC102724428A0A0B4J2F2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
LOC102724428A0A0B4J2F2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
LOC102724428A0A0B4J2F2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
LOC102724428A0A0B4J2F2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
LOC102724428A0A0B4J2F2 RER1-204ENST00000378518 522 ntTSL 3 BASIC26.34■■□□□ 1.81
LOC102724428A0A0B4J2F2 PGM5P4-201ENST00000421970 445 ntBASIC26.34■■□□□ 1.81
LOC102724428A0A0B4J2F2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC26.34■■□□□ 1.81
LOC102724428A0A0B4J2F2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC26.34■■□□□ 1.81
LOC102724428A0A0B4J2F2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC26.34■■□□□ 1.81
LOC102724428A0A0B4J2F2 TK2-213ENST00000563369 882 ntTSL 5 BASIC26.34■■□□□ 1.81
LOC102724428A0A0B4J2F2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
LOC102724428A0A0B4J2F2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC26.34■■□□□ 1.81
LOC102724428A0A0B4J2F2 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC26.34■■□□□ 1.81
LOC102724428A0A0B4J2F2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
LOC102724428A0A0B4J2F2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC26.34■■□□□ 1.81
LOC102724428A0A0B4J2F2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
LOC102724428A0A0B4J2F2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC26.33■■□□□ 1.81
LOC102724428A0A0B4J2F2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC26.33■■□□□ 1.81
LOC102724428A0A0B4J2F2 AL356652.1-201ENST00000615962 565 ntBASIC26.33■■□□□ 1.81
LOC102724428A0A0B4J2F2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
LOC102724428A0A0B4J2F2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC26.32■■□□□ 1.8
LOC102724428A0A0B4J2F2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
LOC102724428A0A0B4J2F2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC26.32■■□□□ 1.8
LOC102724428A0A0B4J2F2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
LOC102724428A0A0B4J2F2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
LOC102724428A0A0B4J2F2 PPOX-219ENST00000544598 813 ntTSL 2 BASIC26.32■■□□□ 1.8
LOC102724428A0A0B4J2F2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC26.32■■□□□ 1.8
LOC102724428A0A0B4J2F2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC26.32■■□□□ 1.8
LOC102724428A0A0B4J2F2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
LOC102724428A0A0B4J2F2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
LOC102724428A0A0B4J2F2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
LOC102724428A0A0B4J2F2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
LOC102724428A0A0B4J2F2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC26.32■■□□□ 1.8
LOC102724428A0A0B4J2F2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
LOC102724428A0A0B4J2F2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
LOC102724428A0A0B4J2F2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
LOC102724428A0A0B4J2F2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
LOC102724428A0A0B4J2F2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC26.31■■□□□ 1.8
LOC102724428A0A0B4J2F2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC26.31■■□□□ 1.8
LOC102724428A0A0B4J2F2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
LOC102724428A0A0B4J2F2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
LOC102724428A0A0B4J2F2 AL390719.1-204ENST00000412397 1219 ntBASIC26.31■■□□□ 1.8
LOC102724428A0A0B4J2F2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
LOC102724428A0A0B4J2F2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
LOC102724428A0A0B4J2F2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
LOC102724428A0A0B4J2F2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
LOC102724428A0A0B4J2F2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
LOC102724428A0A0B4J2F2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
LOC102724428A0A0B4J2F2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC26.3■■□□□ 1.8
LOC102724428A0A0B4J2F2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
LOC102724428A0A0B4J2F2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
LOC102724428A0A0B4J2F2 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
LOC102724428A0A0B4J2F2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
LOC102724428A0A0B4J2F2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
LOC102724428A0A0B4J2F2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
LOC102724428A0A0B4J2F2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC26.3■■□□□ 1.8
LOC102724428A0A0B4J2F2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
LOC102724428A0A0B4J2F2 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
LOC102724428A0A0B4J2F2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LOC102724428A0A0B4J2F2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
LOC102724428A0A0B4J2F2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
LOC102724428A0A0B4J2F2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC26.29■■□□□ 1.8
LOC102724428A0A0B4J2F2 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC26.29■■□□□ 1.8
LOC102724428A0A0B4J2F2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms