Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 TK2-202ENST00000417693 1046 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 MIR6722-201ENST00000617286 78 ntBASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 AC068587.7-201ENST00000641602 218 ntBASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 BID-203ENST00000399765 1879 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 HYI-213ENST00000583037 1322 ntTSL 5 BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TRAV13-2A0A0B4J235 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 AC003102.1-202ENST00000563394 1796 ntBASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 AL499627.2-201ENST00000606283 725 ntBASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 AP000974.1-201ENST00000623909 2387 ntBASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-2A0A0B4J235 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TRAV13-2A0A0B4J235 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-2A0A0B4J235 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-2A0A0B4J235 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-2A0A0B4J235 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-2A0A0B4J235 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC13.54□□□□□ -0.24
TRAV13-2A0A0B4J235 AC087239.1-201ENST00000622671 572 ntBASIC13.54□□□□□ -0.24
TRAV13-2A0A0B4J235 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-2A0A0B4J235 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-2A0A0B4J235 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-2A0A0B4J235 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRAV13-2A0A0B4J235 HTR7P1-202ENST00000624664 4411 ntBASIC13.54□□□□□ -0.24
TRAV13-2A0A0B4J235 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-2A0A0B4J235 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-2A0A0B4J235 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV13-2A0A0B4J235 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-2A0A0B4J235 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-2A0A0B4J235 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TRAV13-2A0A0B4J235 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV13-2A0A0B4J235 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-2A0A0B4J235 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-2A0A0B4J235 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-2A0A0B4J235 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-2A0A0B4J235 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
TRAV13-2A0A0B4J235 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV13-2A0A0B4J235 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-2A0A0B4J235 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV13-2A0A0B4J235 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-2A0A0B4J235 RNF126P1-201ENST00000567452 1320 ntBASIC13.53□□□□□ -0.24
TRAV13-2A0A0B4J235 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-2A0A0B4J235 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV13-2A0A0B4J235 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-2A0A0B4J235 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-2A0A0B4J235 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-2A0A0B4J235 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-2A0A0B4J235 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV13-2A0A0B4J235 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TRAV13-2A0A0B4J235 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-2A0A0B4J235 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV13-2A0A0B4J235 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV13-2A0A0B4J235 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms