Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 AFG3L1P-217ENST00000557444 2447 ntBASIC14.5□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 SMUG1P1-201ENST00000590640 811 ntBASIC14.5□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 AL049796.1-201ENST00000565336 1766 ntBASIC14.5□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 AC009237.3-201ENST00000393279 1427 ntBASIC14.49□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC14.49□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC14.49□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 BX005040.4-201ENST00000637145 1518 ntBASIC14.49□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC14.49□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC14.49□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 ZNRF2P3-201ENST00000424200 374 ntBASIC14.48□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC14.48□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 AP004607.7-201ENST00000527152 1677 ntBASIC14.48□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV8-3A0A0A6YYJ7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms