Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TRBV6-8A0A0A6YYG3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC14.27□□□□□ -0.13
TRBV6-8A0A0A6YYG3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC14.27□□□□□ -0.13
TRBV6-8A0A0A6YYG3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC14.27□□□□□ -0.13
TRBV6-8A0A0A6YYG3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC14.27□□□□□ -0.13
TRBV6-8A0A0A6YYG3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.27□□□□□ -0.13
TRBV6-8A0A0A6YYG3 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.27□□□□□ -0.13
TRBV6-8A0A0A6YYG3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC14.27□□□□□ -0.13
TRBV6-8A0A0A6YYG3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.27□□□□□ -0.13
TRBV6-8A0A0A6YYG3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV6-8A0A0A6YYG3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV6-8A0A0A6YYG3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.27□□□□□ -0.13
TRBV6-8A0A0A6YYG3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
TRBV6-8A0A0A6YYG3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TRBV6-8A0A0A6YYG3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV6-8A0A0A6YYG3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV6-8A0A0A6YYG3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.27□□□□□ -0.13
TRBV6-8A0A0A6YYG3 AC116050.2-201ENST00000612102 1779 ntBASIC14.27□□□□□ -0.13
TRBV6-8A0A0A6YYG3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC14.26□□□□□ -0.13
TRBV6-8A0A0A6YYG3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-8A0A0A6YYG3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TRBV6-8A0A0A6YYG3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-8A0A0A6YYG3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-8A0A0A6YYG3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-8A0A0A6YYG3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-8A0A0A6YYG3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-8A0A0A6YYG3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-8A0A0A6YYG3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-8A0A0A6YYG3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14.26□□□□□ -0.13
TRBV6-8A0A0A6YYG3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC14.26□□□□□ -0.13
TRBV6-8A0A0A6YYG3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.26□□□□□ -0.13
TRBV6-8A0A0A6YYG3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-8A0A0A6YYG3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-8A0A0A6YYG3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC14.26□□□□□ -0.13
TRBV6-8A0A0A6YYG3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-8A0A0A6YYG3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-8A0A0A6YYG3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-8A0A0A6YYG3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC14.26□□□□□ -0.13
TRBV6-8A0A0A6YYG3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC14.26□□□□□ -0.13
TRBV6-8A0A0A6YYG3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TRBV6-8A0A0A6YYG3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRBV6-8A0A0A6YYG3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRBV6-8A0A0A6YYG3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 KRT18P14-201ENST00000534205 1250 ntBASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 SLC7A5P2-201ENST00000553010 536 ntBASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC14.25□□□□□ -0.13
TRBV6-8A0A0A6YYG3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC14.24□□□□□ -0.13
TRBV6-8A0A0A6YYG3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14.24□□□□□ -0.13
TRBV6-8A0A0A6YYG3 AIRN-201ENST00000601203 4374 ntBASIC14.24□□□□□ -0.13
TRBV6-8A0A0A6YYG3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-8A0A0A6YYG3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC14.24□□□□□ -0.13
TRBV6-8A0A0A6YYG3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-8A0A0A6YYG3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-8A0A0A6YYG3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-8A0A0A6YYG3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-8A0A0A6YYG3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
TRBV6-8A0A0A6YYG3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TRBV6-8A0A0A6YYG3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-8A0A0A6YYG3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.24□□□□□ -0.13
TRBV6-8A0A0A6YYG3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-8A0A0A6YYG3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC14.24□□□□□ -0.13
TRBV6-8A0A0A6YYG3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC14.24□□□□□ -0.13
TRBV6-8A0A0A6YYG3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-8A0A0A6YYG3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-8A0A0A6YYG3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-8A0A0A6YYG3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-8A0A0A6YYG3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV6-8A0A0A6YYG3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
TRBV6-8A0A0A6YYG3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRBV6-8A0A0A6YYG3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.23□□□□□ -0.13
TRBV6-8A0A0A6YYG3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV6-8A0A0A6YYG3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRBV6-8A0A0A6YYG3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
TRBV6-8A0A0A6YYG3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms