Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV9-2A0A087WT02 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV9-2A0A087WT02 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRAV9-2A0A087WT02 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV9-2A0A087WT02 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV9-2A0A087WT02 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV9-2A0A087WT02 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV9-2A0A087WT02 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRAV9-2A0A087WT02 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRAV9-2A0A087WT02 VGF-203ENST00000611537 1622 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV9-2A0A087WT02 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV9-2A0A087WT02 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV9-2A0A087WT02 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV9-2A0A087WT02 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TRAV9-2A0A087WT02 AC120498.9-201ENST00000339021 3867 ntBASIC15.21■□□□□ 0.03
TRAV9-2A0A087WT02 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV9-2A0A087WT02 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV9-2A0A087WT02 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TRAV9-2A0A087WT02 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV9-2A0A087WT02 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV9-2A0A087WT02 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV9-2A0A087WT02 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TRAV9-2A0A087WT02 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV9-2A0A087WT02 AIRN-201ENST00000601203 4374 ntBASIC15.21■□□□□ 0.03
TRAV9-2A0A087WT02 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV9-2A0A087WT02 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV9-2A0A087WT02 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV9-2A0A087WT02 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV9-2A0A087WT02 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV9-2A0A087WT02 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV9-2A0A087WT02 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
TRAV9-2A0A087WT02 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV9-2A0A087WT02 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV9-2A0A087WT02 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC15.21■□□□□ 0.02
TRAV9-2A0A087WT02 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV9-2A0A087WT02 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV9-2A0A087WT02 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 AC011298.3-201ENST00000615796 283 ntBASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-2A0A087WT02 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV9-2A0A087WT02 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV9-2A0A087WT02 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV9-2A0A087WT02 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV9-2A0A087WT02 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV9-2A0A087WT02 AC090340.1-201ENST00000620778 4980 ntBASIC15.19■□□□□ 0.02
TRAV9-2A0A087WT02 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV9-2A0A087WT02 HES6-206ENST00000409574 738 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV9-2A0A087WT02 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV9-2A0A087WT02 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV9-2A0A087WT02 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV9-2A0A087WT02 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV9-2A0A087WT02 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV9-2A0A087WT02 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRAV9-2A0A087WT02 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV9-2A0A087WT02 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV9-2A0A087WT02 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV9-2A0A087WT02 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV9-2A0A087WT02 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV9-2A0A087WT02 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRAV9-2A0A087WT02 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV9-2A0A087WT02 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV9-2A0A087WT02 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV9-2A0A087WT02 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 LTB4R2-202ENST00000528054 3092 ntBASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV9-2A0A087WT02 LINC01529-204ENST00000636474 1715 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms