Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 RBBP4-201ENST00000373485 1417 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
MTHFRP42898 CD3EAP-201ENST00000309424 3286 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
MTHFRP42898 ATL1-202ENST00000441560 2853 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
MTHFRP42898 MOCOS-201ENST00000261326 6160 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
MTHFRP42898 ZNF184-201ENST00000211936 3101 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
MTHFRP42898 PSME3-201ENST00000293362 3144 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
MTHFRP42898 TRPV1-207ENST00000572705 4166 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
MTHFRP42898 RPE-206ENST00000429921 2511 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
MTHFRP42898 ATXN7L1-201ENST00000318724 1470 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
MTHFRP42898 CD226-207ENST00000582621 1458 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
MTHFRP42898 RN7SKP75-201ENST00000363070 296 ntBASIC9.75□□□□□ -0.85
MTHFRP42898 FXYD5-202ENST00000392217 632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
MTHFRP42898 C2orf76-204ENST00000409877 950 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
MTHFRP42898 OR8B1P-201ENST00000419328 918 ntBASIC9.75□□□□□ -0.85
MTHFRP42898 AL121910.1-201ENST00000420710 500 ntTSL 3 BASIC9.75□□□□□ -0.85
MTHFRP42898 AL135924.2-201ENST00000427901 361 ntTSL 3 BASIC9.75□□□□□ -0.85
MTHFRP42898 ZNF90P3-201ENST00000450345 1192 ntBASIC9.75□□□□□ -0.85
MTHFRP42898 TDRG1-204ENST00000451810 919 ntTSL 2 BASIC9.75□□□□□ -0.85
MTHFRP42898 AC114744.1-201ENST00000498116 666 ntBASIC9.75□□□□□ -0.85
MTHFRP42898 AC025465.1-201ENST00000503145 797 ntTSL 3 BASIC9.75□□□□□ -0.85
MTHFRP42898 IGLV3-7-201ENST00000522952 271 ntBASIC9.75□□□□□ -0.85
MTHFRP42898 AC105219.3-201ENST00000527579 374 ntTSL 2 BASIC9.75□□□□□ -0.85
MTHFRP42898 AP000866.3-201ENST00000534607 433 ntBASIC9.75□□□□□ -0.85
MTHFRP42898 FLVCR2-202ENST00000539311 1221 ntTSL 2 BASIC9.75□□□□□ -0.85
MTHFRP42898 LINC02328-201ENST00000553668 741 ntTSL 3 BASIC9.75□□□□□ -0.85
MTHFRP42898 AL049634.2-203ENST00000564763 588 ntAPPRIS ALT2 TSL 4 BASIC9.75□□□□□ -0.85
MTHFRP42898 CSNK1A1-209ENST00000606299 1075 ntTSL 3 BASIC9.75□□□□□ -0.85
MTHFRP42898 AL591926.6-201ENST00000617375 415 ntBASIC9.75□□□□□ -0.85
MTHFRP42898 FP565260.4-201ENST00000624081 513 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
MTHFRP42898 FTX-215ENST00000638681 9771 ntTSL 5 BASIC9.75□□□□□ -0.85
MTHFRP42898 ZNF226-215ENST00000590089 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
MTHFRP42898 WDR20-201ENST00000299135 2198 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
MTHFRP42898 PLS1-202ENST00000457734 3706 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
MTHFRP42898 IK-201ENST00000417647 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
MTHFRP42898 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
MTHFRP42898 CUL2-204ENST00000374751 4233 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
MTHFRP42898 NGDN-201ENST00000397154 2204 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
MTHFRP42898 ADGRG1-216ENST00000562631 4042 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
MTHFRP42898 MIA3-202ENST00000344507 2026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
MTHFRP42898 LMO3-224ENST00000540848 1574 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
MTHFRP42898 HMBOX1-201ENST00000287701 3184 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
MTHFRP42898 AL513534.1-201ENST00000562082 2295 ntBASIC9.75□□□□□ -0.85
MTHFRP42898 EDA-213ENST00000616899 4643 ntTSL 5 BASIC9.75□□□□□ -0.85
MTHFRP42898 BSN-201ENST00000296452 15955 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
MTHFRP42898 DGKG-201ENST00000265022 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
MTHFRP42898 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
MTHFRP42898 SLC39A6-201ENST00000269187 3543 ntAPPRIS P3 TSL 2 BASIC9.74□□□□□ -0.85
MTHFRP42898 B3GALNT1-208ENST00000473285 2123 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
MTHFRP42898 UBE2D3-203ENST00000343106 2389 ntAPPRIS P4 TSL 2 BASIC9.74□□□□□ -0.85
MTHFRP42898 MAPK10-382ENST00000642023 2369 ntBASIC9.74□□□□□ -0.85
MTHFRP42898 ADAM9-209ENST00000487273 3839 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
MTHFRP42898 ARHGAP5-204ENST00000432921 5003 ntTSL 5 BASIC9.74□□□□□ -0.85
MTHFRP42898 ARHGEF9-225ENST00000636276 4097 ntTSL 5 BASIC9.74□□□□□ -0.85
MTHFRP42898 FAM98B-203ENST00000491535 3111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
MTHFRP42898 GALNTL6-203ENST00000506823 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
MTHFRP42898 SH2D1A-202ENST00000371139 2450 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
MTHFRP42898 ZSCAN26-206ENST00000619937 2729 ntAPPRIS ALT1 TSL 2 BASIC9.74□□□□□ -0.85
MTHFRP42898 CDH23-213ENST00000619887 4224 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
MTHFRP42898 IFT122-206ENST00000440957 4007 ntTSL 2 BASIC9.74□□□□□ -0.85
MTHFRP42898 PPIH-203ENST00000372550 665 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
MTHFRP42898 SERPINB8-204ENST00000397988 1178 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
MTHFRP42898 OSTCP6-201ENST00000407493 457 ntBASIC9.74□□□□□ -0.85
MTHFRP42898 AL671883.1-201ENST00000421191 306 ntBASIC9.74□□□□□ -0.85
MTHFRP42898 AC007362.1-208ENST00000423425 553 ntTSL 4 BASIC9.74□□□□□ -0.85
MTHFRP42898 SOX9-AS1-203ENST00000424417 576 ntTSL 4 BASIC9.74□□□□□ -0.85
MTHFRP42898 AL032821.1-201ENST00000430895 581 ntTSL 5 BASIC9.74□□□□□ -0.85
MTHFRP42898 RN7SL685P-201ENST00000476271 298 ntBASIC9.74□□□□□ -0.85
MTHFRP42898 LINC01322-203ENST00000496693 1075 ntTSL 5 BASIC9.74□□□□□ -0.85
MTHFRP42898 RN7SL62P-201ENST00000498506 297 ntBASIC9.74□□□□□ -0.85
MTHFRP42898 RPPH1-3P-201ENST00000516541 322 ntBASIC9.74□□□□□ -0.85
MTHFRP42898 AC100860.1-201ENST00000517606 1064 ntTSL 4 BASIC9.74□□□□□ -0.85
MTHFRP42898 PGA3-204ENST00000538258 867 ntTSL 2 BASIC9.74□□□□□ -0.85
MTHFRP42898 PGA3-207ENST00000543125 968 ntTSL 2 BASIC9.74□□□□□ -0.85
MTHFRP42898 PGA4-206ENST00000544899 867 ntTSL 2 BASIC9.74□□□□□ -0.85
MTHFRP42898 AC005180.1-201ENST00000591137 587 ntTSL 4 BASIC9.74□□□□□ -0.85
MTHFRP42898 U62631.1-201ENST00000597110 435 ntTSL 3 BASIC9.74□□□□□ -0.85
MTHFRP42898 AC023302.1-201ENST00000607458 492 ntBASIC9.74□□□□□ -0.85
MTHFRP42898 PCDH18-206ENST00000611581 819 ntTSL 4 BASIC9.74□□□□□ -0.85
MTHFRP42898 AL139093.1-201ENST00000622029 1014 ntBASIC9.74□□□□□ -0.85
MTHFRP42898 AC004241.4-201ENST00000622792 1120 ntBASIC9.74□□□□□ -0.85
MTHFRP42898 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC9.74□□□□□ -0.85
MTHFRP42898 AC009122.1-201ENST00000640559 1218 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
MTHFRP42898 STAT1-204ENST00000409465 3097 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
MTHFRP42898 GID8-201ENST00000266069 4397 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
MTHFRP42898 PPP2R5D-203ENST00000461010 1558 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
MTHFRP42898 AC004801.7-201ENST00000624535 2973 ntBASIC9.74□□□□□ -0.85
MTHFRP42898 BMS1P4-203ENST00000580790 1913 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
MTHFRP42898 FGD3-201ENST00000337352 3303 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
MTHFRP42898 FAM13A-222ENST00000515600 2206 ntAPPRIS ALT2 TSL 3 BASIC9.74□□□□□ -0.85
MTHFRP42898 SEC16A-204ENST00000313084 3073 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
MTHFRP42898 SH3GLB1-203ENST00000535010 6227 ntTSL 2 BASIC9.74□□□□□ -0.85
MTHFRP42898 ANXA2-204ENST00000451270 1435 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
MTHFRP42898 DCLK1-202ENST00000360631 8007 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
MTHFRP42898 VSIG4-202ENST00000412866 1474 ntTSL 2 BASIC9.73□□□□□ -0.85
MTHFRP42898 PEX2-204ENST00000520103 1470 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
MTHFRP42898 AC108463.3-201ENST00000603748 1482 ntBASIC9.73□□□□□ -0.85
MTHFRP42898 PXYLP1-204ENST00000504264 1773 ntTSL 2 BASIC9.73□□□□□ -0.85
MTHFRP42898 HIVEP3-201ENST00000372583 12193 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
MTHFRP42898 TAOK3-209ENST00000537952 2147 ntTSL 2 BASIC9.73□□□□□ -0.85
MTHFRP42898 SMIM8-206ENST00000608353 2111 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms