Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 STEAP2-206ENST00000394632 2072 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
NPIPA3F8WFD2 CLNK-202ENST00000442825 1539 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
NPIPA3F8WFD2 AC002464.1-201ENST00000569685 1530 ntBASIC8.46□□□□□ -1.05
NPIPA3F8WFD2 APOBEC1-201ENST00000229304 879 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 TEX35-201ENST00000319416 1023 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 GLYATL3-201ENST00000371197 1113 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 TCEANC2-202ENST00000371331 936 ntTSL 2 BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 YWHAZ-202ENST00000395948 812 ntTSL 3 BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 ERICH2-201ENST00000409885 601 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 MRPL48-204ENST00000411840 1197 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 AL589935.1-204ENST00000423255 407 ntTSL 3 BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 RFX3-AS1-202ENST00000427722 1088 ntTSL 5 BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 AC064862.2-201ENST00000445460 196 ntBASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 RN7SL541P-201ENST00000464317 283 ntBASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 SEC22A-210ENST00000492595 972 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 AC100771.1-201ENST00000496450 279 ntBASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 AC114744.1-201ENST00000498116 666 ntBASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 IGLVI-56-201ENST00000521342 342 ntBASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 ASPH-225ENST00000522835 1258 ntTSL 2 BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 AP005135.1-201ENST00000532071 714 ntTSL 3 BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 AP003396.2-201ENST00000533726 1297 ntBASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 ADGRG1-203ENST00000540164 3820 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 VPS13D-212ENST00000543766 3838 ntTSL 2 BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 AL359792.1-201ENST00000554046 385 ntTSL 3 BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 DRAIC-204ENST00000558781 1222 ntTSL 5 BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 LINC02191-201ENST00000568036 518 ntTSL 4 BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 LINC00555-201ENST00000569288 442 ntBASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 RN7SL457P-201ENST00000578760 287 ntBASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 HMGN1P31-201ENST00000590085 304 ntBASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 AC100843.3-201ENST00000591796 259 ntBASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 TEX26-AS1-217ENST00000593246 797 ntTSL 5 BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 AC010615.2-204ENST00000600469 830 ntTSL 3 BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 AC010359.1-201ENST00000602982 507 ntBASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 PRSS3P3-202ENST00000618042 682 ntBASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 MIR6834-201ENST00000622807 81 ntBASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 LINC01727-202ENST00000623256 1218 ntTSL 4 BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 AP000787.3-201ENST00000634407 307 ntBASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 NUTM1-202ENST00000438749 3922 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 FBXL2-222ENST00000538892 2793 ntTSL 5 BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 KDM2A-212ENST00000530342 3651 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 AC008514.2-201ENST00000522096 1337 ntBASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 CCT2-203ENST00000544368 1728 ntTSL 5 BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 CPEB1-209ENST00000614918 4882 ntTSL 5 BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 DHFR-202ENST00000504396 1447 ntTSL 2 BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
NPIPA3F8WFD2 SMARCA1-202ENST00000371122 4099 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 KCNA2-203ENST00000485317 2496 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 CLUL1-203ENST00000540035 2199 ntTSL 2 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 KCNE1-208ENST00000611936 3222 ntAPPRIS P1 TSL 4 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 LINC01660-204ENST00000619172 3572 ntTSL 5 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 CU634019.1-201ENST00000623095 2247 ntTSL 2 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 CU633904.1-202ENST00000625096 2247 ntTSL 2 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 FIGNL1-206ENST00000433017 3626 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 ZNF185-204ENST00000370268 4305 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 ADGRE3-202ENST00000344373 2267 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 GAB3-202ENST00000369575 4718 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 CCNJL-208ENST00000541762 2965 ntTSL 5 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 ENTPD1-210ENST00000543964 1579 ntTSL 2 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 GNG2-201ENST00000335281 3729 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 ST5-213ENST00000526757 3019 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 ATP6V0A1-201ENST00000264649 4110 ntAPPRIS P4 TSL 1 (best) BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 EXOSC2-211ENST00000546165 1956 ntTSL 2 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 DCTN6-201ENST00000221114 1127 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 RN7SKP87-201ENST00000364096 301 ntBASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 TDRKH-AS1-201ENST00000389897 992 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 CCDC144NL-AS1-202ENST00000423473 839 ntTSL 5 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 AL139246.1-201ENST00000424657 455 ntTSL 3 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 AC146944.2-202ENST00000425529 658 ntTSL 3 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 AC016738.2-203ENST00000433012 489 ntTSL 3 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 AL162253.1-201ENST00000443792 758 ntTSL 3 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 NDUFA5P3-201ENST00000449348 345 ntBASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 HNRNPA3P2-201ENST00000451198 662 ntBASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 LINC00297-201ENST00000453470 913 ntTSL 2 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 UBE2R2-AS1-201ENST00000454429 647 ntTSL 5 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 AC099681.1-201ENST00000454777 552 ntTSL 4 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 AL445673.1-201ENST00000455124 416 ntTSL 3 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 AC108865.1-201ENST00000507644 496 ntTSL 3 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 TMEM267-204ENST00000510130 721 ntTSL 3 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 DCTN6-203ENST00000520829 880 ntTSL 2 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 ACTR3C-205ENST00000539352 570 ntTSL 5 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 AC074032.1-202ENST00000552815 467 ntTSL 3 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 DIO2-211ENST00000557125 517 ntTSL 3 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 AC018554.2-201ENST00000563482 261 ntBASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 AC010760.1-201ENST00000565129 545 ntTSL 2 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 AC003965.1-201ENST00000575693 667 ntTSL 3 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 ZNF527-204ENST00000587349 999 ntTSL 3 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 ZNF283-205ENST00000590950 466 ntTSL 5 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 AC010320.3-201ENST00000594865 447 ntTSL 3 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 AC112219.2-201ENST00000608390 532 ntBASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 PHBP6-201ENST00000614021 786 ntBASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 Z99916.3-201ENST00000623422 1080 ntBASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 AC135068.7-201ENST00000630145 568 ntTSL 2 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 AL450332.1-203ENST00000638742 1268 ntTSL 5 BASIC8.45□□□□□ -1.06
NPIPA3F8WFD2 MLH1-222ENST00000539477 2366 ntTSL 2 BASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 243.8 ms