Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DRB4X5D2U9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DRB4X5D2U9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
HLA-DRB4X5D2U9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DRB4X5D2U9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
HLA-DRB4X5D2U9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
HLA-DRB4X5D2U9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DRB4X5D2U9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DRB4X5D2U9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRB4X5D2U9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRB4X5D2U9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRB4X5D2U9 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRB4X5D2U9 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRB4X5D2U9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
HLA-DRB4X5D2U9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRB4X5D2U9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.43■□□□□ 0.06
HLA-DRB4X5D2U9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRB4X5D2U9 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRB4X5D2U9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRB4X5D2U9 AC245052.3-201ENST00000450182 901 ntBASIC15.43■□□□□ 0.06
HLA-DRB4X5D2U9 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRB4X5D2U9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
HLA-DRB4X5D2U9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC15.43■□□□□ 0.06
HLA-DRB4X5D2U9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRB4X5D2U9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRB4X5D2U9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRB4X5D2U9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRB4X5D2U9 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRB4X5D2U9 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRB4X5D2U9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC15.43■□□□□ 0.06
HLA-DRB4X5D2U9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC15.43■□□□□ 0.06
HLA-DRB4X5D2U9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRB4X5D2U9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
HLA-DRB4X5D2U9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HLA-DRB4X5D2U9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
HLA-DRB4X5D2U9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DRB4X5D2U9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DRB4X5D2U9 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DRB4X5D2U9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.42■□□□□ 0.06
HLA-DRB4X5D2U9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DRB4X5D2U9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DRB4X5D2U9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DRB4X5D2U9 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
HLA-DRB4X5D2U9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC15.42■□□□□ 0.06
HLA-DRB4X5D2U9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC15.42■□□□□ 0.06
HLA-DRB4X5D2U9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
HLA-DRB4X5D2U9 SLC7A5P2-201ENST00000553010 536 ntBASIC15.42■□□□□ 0.06
HLA-DRB4X5D2U9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC15.42■□□□□ 0.06
HLA-DRB4X5D2U9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DRB4X5D2U9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
HLA-DRB4X5D2U9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DRB4X5D2U9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC15.42■□□□□ 0.06
HLA-DRB4X5D2U9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DRB4X5D2U9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HLA-DRB4X5D2U9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
HLA-DRB4X5D2U9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HLA-DRB4X5D2U9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
HLA-DRB4X5D2U9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRB4X5D2U9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRB4X5D2U9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRB4X5D2U9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRB4X5D2U9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRB4X5D2U9 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRB4X5D2U9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRB4X5D2U9 KRT18P5-201ENST00000436075 1291 ntBASIC15.41■□□□□ 0.06
HLA-DRB4X5D2U9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRB4X5D2U9 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRB4X5D2U9 SLC7A5P1-201ENST00000568957 537 ntBASIC15.41■□□□□ 0.06
HLA-DRB4X5D2U9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRB4X5D2U9 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC15.41■□□□□ 0.06
HLA-DRB4X5D2U9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC15.41■□□□□ 0.06
HLA-DRB4X5D2U9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRB4X5D2U9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC15.41■□□□□ 0.06
HLA-DRB4X5D2U9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRB4X5D2U9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HLA-DRB4X5D2U9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRB4X5D2U9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HLA-DRB4X5D2U9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.41■□□□□ 0.06
HLA-DRB4X5D2U9 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HLA-DRB4X5D2U9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
HLA-DRB4X5D2U9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC15.4■□□□□ 0.06
HLA-DRB4X5D2U9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC15.4■□□□□ 0.06
HLA-DRB4X5D2U9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DRB4X5D2U9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC15.4■□□□□ 0.06
HLA-DRB4X5D2U9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DRB4X5D2U9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DRB4X5D2U9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.4■□□□□ 0.06
HLA-DRB4X5D2U9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.4■□□□□ 0.06
HLA-DRB4X5D2U9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
HLA-DRB4X5D2U9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC15.4■□□□□ 0.06
HLA-DRB4X5D2U9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC15.4■□□□□ 0.06
HLA-DRB4X5D2U9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.4■□□□□ 0.06
HLA-DRB4X5D2U9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
HLA-DRB4X5D2U9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
HLA-DRB4X5D2U9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HLA-DRB4X5D2U9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRB4X5D2U9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HLA-DRB4X5D2U9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.39■□□□□ 0.05
HLA-DRB4X5D2U9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC15.39■□□□□ 0.05
HLA-DRB4X5D2U9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms