Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
CLDN16Q9Y5I7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN16Q9Y5I7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN16Q9Y5I7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN16Q9Y5I7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN16Q9Y5I7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN16Q9Y5I7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN16Q9Y5I7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN16Q9Y5I7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.2■□□□□ 0.66
CLDN16Q9Y5I7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN16Q9Y5I7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN16Q9Y5I7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CLDN16Q9Y5I7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN16Q9Y5I7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.2■□□□□ 0.66
CLDN16Q9Y5I7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.2■□□□□ 0.66
CLDN16Q9Y5I7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN16Q9Y5I7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.2■□□□□ 0.66
CLDN16Q9Y5I7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CLDN16Q9Y5I7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN16Q9Y5I7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN16Q9Y5I7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
CLDN16Q9Y5I7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN16Q9Y5I7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN16Q9Y5I7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN16Q9Y5I7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN16Q9Y5I7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN16Q9Y5I7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN16Q9Y5I7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN16Q9Y5I7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN16Q9Y5I7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN16Q9Y5I7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN16Q9Y5I7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN16Q9Y5I7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN16Q9Y5I7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN16Q9Y5I7 AC098934.4-201ENST00000564127 592 ntBASIC19.19■□□□□ 0.66
CLDN16Q9Y5I7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.19■□□□□ 0.66
CLDN16Q9Y5I7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN16Q9Y5I7 AC006128.1-201ENST00000624704 1661 ntBASIC19.19■□□□□ 0.66
CLDN16Q9Y5I7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN16Q9Y5I7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN16Q9Y5I7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN16Q9Y5I7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN16Q9Y5I7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.19■□□□□ 0.66
CLDN16Q9Y5I7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN16Q9Y5I7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
CLDN16Q9Y5I7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN16Q9Y5I7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN16Q9Y5I7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.19■□□□□ 0.66
CLDN16Q9Y5I7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN16Q9Y5I7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.18■□□□□ 0.66
CLDN16Q9Y5I7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CLDN16Q9Y5I7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.18■□□□□ 0.66
CLDN16Q9Y5I7 AC087633.2-202ENST00000565166 1439 ntBASIC19.18■□□□□ 0.66
CLDN16Q9Y5I7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN16Q9Y5I7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.18■□□□□ 0.66
CLDN16Q9Y5I7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.18■□□□□ 0.66
CLDN16Q9Y5I7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN16Q9Y5I7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CLDN16Q9Y5I7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN16Q9Y5I7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN16Q9Y5I7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CLDN16Q9Y5I7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.18■□□□□ 0.66
CLDN16Q9Y5I7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.18■□□□□ 0.66
CLDN16Q9Y5I7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN16Q9Y5I7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN16Q9Y5I7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
CLDN16Q9Y5I7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN16Q9Y5I7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN16Q9Y5I7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.18■□□□□ 0.66
CLDN16Q9Y5I7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.18■□□□□ 0.66
CLDN16Q9Y5I7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN16Q9Y5I7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN16Q9Y5I7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN16Q9Y5I7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN16Q9Y5I7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN16Q9Y5I7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.17■□□□□ 0.66
CLDN16Q9Y5I7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CLDN16Q9Y5I7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.17■□□□□ 0.66
CLDN16Q9Y5I7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN16Q9Y5I7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CLDN16Q9Y5I7 SLC29A4P1-201ENST00000398760 971 ntBASIC19.17■□□□□ 0.66
CLDN16Q9Y5I7 BX276092.2-201ENST00000417668 665 ntBASIC19.17■□□□□ 0.66
CLDN16Q9Y5I7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.17■□□□□ 0.66
CLDN16Q9Y5I7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDN16Q9Y5I7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.17■□□□□ 0.66
CLDN16Q9Y5I7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.17■□□□□ 0.66
CLDN16Q9Y5I7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CLDN16Q9Y5I7 AC092118.2-201ENST00000613495 667 ntBASIC19.17■□□□□ 0.66
CLDN16Q9Y5I7 MIR2861-201ENST00000636310 90 ntBASIC19.17■□□□□ 0.66
CLDN16Q9Y5I7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.17■□□□□ 0.66
CLDN16Q9Y5I7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDN16Q9Y5I7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN16Q9Y5I7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.17■□□□□ 0.66
CLDN16Q9Y5I7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN16Q9Y5I7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN16Q9Y5I7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CLDN16Q9Y5I7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN16Q9Y5I7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.16■□□□□ 0.66
CLDN16Q9Y5I7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN16Q9Y5I7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms