Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AP4S1Q9Y587 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AP4S1Q9Y587 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.42■□□□□ 0.7
AP4S1Q9Y587 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP4S1Q9Y587 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP4S1Q9Y587 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
AP4S1Q9Y587 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.41■□□□□ 0.7
AP4S1Q9Y587 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
AP4S1Q9Y587 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
AP4S1Q9Y587 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.41■□□□□ 0.7
AP4S1Q9Y587 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
AP4S1Q9Y587 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP4S1Q9Y587 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.41■□□□□ 0.7
AP4S1Q9Y587 KRT125P-201ENST00000546827 989 ntBASIC19.41■□□□□ 0.7
AP4S1Q9Y587 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.41■□□□□ 0.7
AP4S1Q9Y587 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP4S1Q9Y587 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
AP4S1Q9Y587 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP4S1Q9Y587 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.41■□□□□ 0.7
AP4S1Q9Y587 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP4S1Q9Y587 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.41■□□□□ 0.7
AP4S1Q9Y587 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP4S1Q9Y587 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP4S1Q9Y587 AP000974.1-201ENST00000623909 2387 ntBASIC19.41■□□□□ 0.7
AP4S1Q9Y587 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
AP4S1Q9Y587 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
AP4S1Q9Y587 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.41■□□□□ 0.7
AP4S1Q9Y587 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
AP4S1Q9Y587 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
AP4S1Q9Y587 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.41■□□□□ 0.7
AP4S1Q9Y587 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP4S1Q9Y587 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP4S1Q9Y587 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AP4S1Q9Y587 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP4S1Q9Y587 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.4■□□□□ 0.7
AP4S1Q9Y587 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP4S1Q9Y587 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.4■□□□□ 0.7
AP4S1Q9Y587 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.4■□□□□ 0.7
AP4S1Q9Y587 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.4■□□□□ 0.7
AP4S1Q9Y587 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.4■□□□□ 0.7
AP4S1Q9Y587 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
AP4S1Q9Y587 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.4■□□□□ 0.7
AP4S1Q9Y587 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AP4S1Q9Y587 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP4S1Q9Y587 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.4■□□□□ 0.7
AP4S1Q9Y587 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP4S1Q9Y587 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AP4S1Q9Y587 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP4S1Q9Y587 MIR3181-201ENST00000578512 73 ntBASIC19.39■□□□□ 0.69
AP4S1Q9Y587 AC010525.1-201ENST00000585559 441 ntBASIC19.39■□□□□ 0.69
AP4S1Q9Y587 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
AP4S1Q9Y587 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
AP4S1Q9Y587 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
AP4S1Q9Y587 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
AP4S1Q9Y587 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP4S1Q9Y587 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.38■□□□□ 0.69
AP4S1Q9Y587 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP4S1Q9Y587 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP4S1Q9Y587 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
AP4S1Q9Y587 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
AP4S1Q9Y587 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
AP4S1Q9Y587 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP4S1Q9Y587 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.38■□□□□ 0.69
AP4S1Q9Y587 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.38■□□□□ 0.69
AP4S1Q9Y587 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.38■□□□□ 0.69
AP4S1Q9Y587 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP4S1Q9Y587 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.38■□□□□ 0.69
AP4S1Q9Y587 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP4S1Q9Y587 AC099791.2-201ENST00000605725 427 ntBASIC19.38■□□□□ 0.69
AP4S1Q9Y587 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
AP4S1Q9Y587 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP4S1Q9Y587 AL158211.5-201ENST00000623583 2518 ntBASIC19.38■□□□□ 0.69
AP4S1Q9Y587 AC125437.2-201ENST00000625180 2167 ntBASIC19.37■□□□□ 0.69
AP4S1Q9Y587 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP4S1Q9Y587 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP4S1Q9Y587 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.37■□□□□ 0.69
AP4S1Q9Y587 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
AP4S1Q9Y587 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
AP4S1Q9Y587 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
AP4S1Q9Y587 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP4S1Q9Y587 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.37■□□□□ 0.69
AP4S1Q9Y587 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP4S1Q9Y587 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP4S1Q9Y587 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
AP4S1Q9Y587 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP4S1Q9Y587 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.37■□□□□ 0.69
AP4S1Q9Y587 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
AP4S1Q9Y587 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP4S1Q9Y587 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
AP4S1Q9Y587 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP4S1Q9Y587 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
AP4S1Q9Y587 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP4S1Q9Y587 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
AP4S1Q9Y587 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP4S1Q9Y587 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP4S1Q9Y587 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP4S1Q9Y587 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP4S1Q9Y587 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP4S1Q9Y587 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
AP4S1Q9Y587 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms