Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MRPS28Q9Y2Q9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MRPS28Q9Y2Q9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.69■□□□□ 0.42
MRPS28Q9Y2Q9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MRPS28Q9Y2Q9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
MRPS28Q9Y2Q9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
MRPS28Q9Y2Q9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
MRPS28Q9Y2Q9 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
MRPS28Q9Y2Q9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
MRPS28Q9Y2Q9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.68■□□□□ 0.42
MRPS28Q9Y2Q9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MRPS28Q9Y2Q9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.68■□□□□ 0.42
MRPS28Q9Y2Q9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.68■□□□□ 0.42
MRPS28Q9Y2Q9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MRPS28Q9Y2Q9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MRPS28Q9Y2Q9 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.68■□□□□ 0.42
MRPS28Q9Y2Q9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
MRPS28Q9Y2Q9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MRPS28Q9Y2Q9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.68■□□□□ 0.42
MRPS28Q9Y2Q9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
MRPS28Q9Y2Q9 AC096631.2-201ENST00000436136 790 ntBASIC17.68■□□□□ 0.42
MRPS28Q9Y2Q9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.68■□□□□ 0.42
MRPS28Q9Y2Q9 AL512408.1-201ENST00000569378 2000 ntBASIC17.68■□□□□ 0.42
MRPS28Q9Y2Q9 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.68■□□□□ 0.42
MRPS28Q9Y2Q9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
MRPS28Q9Y2Q9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MRPS28Q9Y2Q9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.68■□□□□ 0.42
MRPS28Q9Y2Q9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.68■□□□□ 0.42
MRPS28Q9Y2Q9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.68■□□□□ 0.42
MRPS28Q9Y2Q9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MRPS28Q9Y2Q9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MRPS28Q9Y2Q9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MRPS28Q9Y2Q9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MRPS28Q9Y2Q9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
MRPS28Q9Y2Q9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MRPS28Q9Y2Q9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MRPS28Q9Y2Q9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
MRPS28Q9Y2Q9 AP001330.3-201ENST00000520123 633 ntBASIC17.67■□□□□ 0.42
MRPS28Q9Y2Q9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.67■□□□□ 0.42
MRPS28Q9Y2Q9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.67■□□□□ 0.42
MRPS28Q9Y2Q9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.67■□□□□ 0.42
MRPS28Q9Y2Q9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MRPS28Q9Y2Q9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
MRPS28Q9Y2Q9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
MRPS28Q9Y2Q9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MRPS28Q9Y2Q9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.67■□□□□ 0.42
MRPS28Q9Y2Q9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MRPS28Q9Y2Q9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
MRPS28Q9Y2Q9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MRPS28Q9Y2Q9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.66■□□□□ 0.42
MRPS28Q9Y2Q9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
MRPS28Q9Y2Q9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MRPS28Q9Y2Q9 AL162377.1-201ENST00000618844 1793 ntBASIC17.66■□□□□ 0.42
MRPS28Q9Y2Q9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
MRPS28Q9Y2Q9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MRPS28Q9Y2Q9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.66■□□□□ 0.42
MRPS28Q9Y2Q9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.66■□□□□ 0.42
MRPS28Q9Y2Q9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
MRPS28Q9Y2Q9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MRPS28Q9Y2Q9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MRPS28Q9Y2Q9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MRPS28Q9Y2Q9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.66■□□□□ 0.42
MRPS28Q9Y2Q9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.66■□□□□ 0.42
MRPS28Q9Y2Q9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.66■□□□□ 0.42
MRPS28Q9Y2Q9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MRPS28Q9Y2Q9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
MRPS28Q9Y2Q9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MRPS28Q9Y2Q9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.66■□□□□ 0.42
MRPS28Q9Y2Q9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
MRPS28Q9Y2Q9 AFG3L1P-217ENST00000557444 2447 ntBASIC17.66■□□□□ 0.42
MRPS28Q9Y2Q9 RASA4CP-201ENST00000424092 1398 ntBASIC17.66■□□□□ 0.42
MRPS28Q9Y2Q9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.66■□□□□ 0.42
MRPS28Q9Y2Q9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.65■□□□□ 0.42
MRPS28Q9Y2Q9 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
MRPS28Q9Y2Q9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.65■□□□□ 0.42
MRPS28Q9Y2Q9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.65■□□□□ 0.42
MRPS28Q9Y2Q9 EDA-201ENST00000338901 1233 ntBASIC17.65■□□□□ 0.42
MRPS28Q9Y2Q9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.65■□□□□ 0.42
MRPS28Q9Y2Q9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.65■□□□□ 0.42
MRPS28Q9Y2Q9 AC106739.1-201ENST00000617035 715 ntBASIC17.65■□□□□ 0.42
MRPS28Q9Y2Q9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MRPS28Q9Y2Q9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.65■□□□□ 0.42
MRPS28Q9Y2Q9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MRPS28Q9Y2Q9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.65■□□□□ 0.42
MRPS28Q9Y2Q9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MRPS28Q9Y2Q9 AC008406.3-201ENST00000620001 1374 ntBASIC17.65■□□□□ 0.42
MRPS28Q9Y2Q9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MRPS28Q9Y2Q9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
MRPS28Q9Y2Q9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.64■□□□□ 0.42
MRPS28Q9Y2Q9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
MRPS28Q9Y2Q9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MRPS28Q9Y2Q9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
MRPS28Q9Y2Q9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
MRPS28Q9Y2Q9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MRPS28Q9Y2Q9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MRPS28Q9Y2Q9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
MRPS28Q9Y2Q9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MRPS28Q9Y2Q9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MRPS28Q9Y2Q9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MRPS28Q9Y2Q9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms