Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.78■□□□□ 0.28
RCL1Q9Y2P8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RCL1Q9Y2P8 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RCL1Q9Y2P8 BX323043.1-201ENST00000641006 1765 ntBASIC16.78■□□□□ 0.28
RCL1Q9Y2P8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.78■□□□□ 0.28
RCL1Q9Y2P8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.78■□□□□ 0.28
RCL1Q9Y2P8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RCL1Q9Y2P8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RCL1Q9Y2P8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.78■□□□□ 0.28
RCL1Q9Y2P8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RCL1Q9Y2P8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RCL1Q9Y2P8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RCL1Q9Y2P8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.77■□□□□ 0.28
RCL1Q9Y2P8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.77■□□□□ 0.28
RCL1Q9Y2P8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RCL1Q9Y2P8 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RCL1Q9Y2P8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RCL1Q9Y2P8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RCL1Q9Y2P8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.77■□□□□ 0.28
RCL1Q9Y2P8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RCL1Q9Y2P8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RCL1Q9Y2P8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RCL1Q9Y2P8 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RCL1Q9Y2P8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RCL1Q9Y2P8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RCL1Q9Y2P8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RCL1Q9Y2P8 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RCL1Q9Y2P8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RCL1Q9Y2P8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RCL1Q9Y2P8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RCL1Q9Y2P8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RCL1Q9Y2P8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.77■□□□□ 0.27
RCL1Q9Y2P8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RCL1Q9Y2P8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RCL1Q9Y2P8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RCL1Q9Y2P8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RCL1Q9Y2P8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RCL1Q9Y2P8 TCF3P1-201ENST00000423021 1937 ntBASIC16.76■□□□□ 0.27
RCL1Q9Y2P8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RCL1Q9Y2P8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RCL1Q9Y2P8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.76■□□□□ 0.27
RCL1Q9Y2P8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RCL1Q9Y2P8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
RCL1Q9Y2P8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RCL1Q9Y2P8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RCL1Q9Y2P8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RCL1Q9Y2P8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RCL1Q9Y2P8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.76■□□□□ 0.27
RCL1Q9Y2P8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.76■□□□□ 0.27
RCL1Q9Y2P8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RCL1Q9Y2P8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RCL1Q9Y2P8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RCL1Q9Y2P8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RCL1Q9Y2P8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RCL1Q9Y2P8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RCL1Q9Y2P8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RCL1Q9Y2P8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RCL1Q9Y2P8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RCL1Q9Y2P8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RCL1Q9Y2P8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RCL1Q9Y2P8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RCL1Q9Y2P8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 AC098818.2-201ENST00000564925 2320 ntBASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 MIR6724-1-201ENST00000616420 92 ntBASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 MIR6724-2-201ENST00000616483 92 ntBASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 MIR6724-4-201ENST00000617390 92 ntBASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 MIR6724-3-201ENST00000622482 92 ntBASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RCL1Q9Y2P8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RCL1Q9Y2P8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RCL1Q9Y2P8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RCL1Q9Y2P8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RCL1Q9Y2P8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RCL1Q9Y2P8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RCL1Q9Y2P8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RCL1Q9Y2P8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms