Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LHX6Q9UPM6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.44■□□□□ 0.7
LHX6Q9UPM6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LHX6Q9UPM6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LHX6Q9UPM6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LHX6Q9UPM6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
LHX6Q9UPM6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.44■□□□□ 0.7
LHX6Q9UPM6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.44■□□□□ 0.7
LHX6Q9UPM6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.44■□□□□ 0.7
LHX6Q9UPM6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.44■□□□□ 0.7
LHX6Q9UPM6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LHX6Q9UPM6 AL589743.5-201ENST00000616611 1050 ntBASIC19.44■□□□□ 0.7
LHX6Q9UPM6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LHX6Q9UPM6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.44■□□□□ 0.7
LHX6Q9UPM6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LHX6Q9UPM6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LHX6Q9UPM6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LHX6Q9UPM6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LHX6Q9UPM6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
LHX6Q9UPM6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LHX6Q9UPM6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LHX6Q9UPM6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LHX6Q9UPM6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LHX6Q9UPM6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LHX6Q9UPM6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.43■□□□□ 0.7
LHX6Q9UPM6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LHX6Q9UPM6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LHX6Q9UPM6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LHX6Q9UPM6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LHX6Q9UPM6 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LHX6Q9UPM6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LHX6Q9UPM6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.43■□□□□ 0.7
LHX6Q9UPM6 AL034346.1-201ENST00000568244 1277 ntBASIC19.43■□□□□ 0.7
LHX6Q9UPM6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.43■□□□□ 0.7
LHX6Q9UPM6 MTDHP1-201ENST00000605323 784 ntBASIC19.43■□□□□ 0.7
LHX6Q9UPM6 AC110285.5-201ENST00000611501 352 ntBASIC19.43■□□□□ 0.7
LHX6Q9UPM6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LHX6Q9UPM6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
LHX6Q9UPM6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LHX6Q9UPM6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LHX6Q9UPM6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.43■□□□□ 0.7
LHX6Q9UPM6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LHX6Q9UPM6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LHX6Q9UPM6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
LHX6Q9UPM6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.43■□□□□ 0.7
LHX6Q9UPM6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LHX6Q9UPM6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LHX6Q9UPM6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.42■□□□□ 0.7
LHX6Q9UPM6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LHX6Q9UPM6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
LHX6Q9UPM6 LINC00526-201ENST00000581067 1875 ntBASIC19.42■□□□□ 0.7
LHX6Q9UPM6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LHX6Q9UPM6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LHX6Q9UPM6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LHX6Q9UPM6 UPK3BP1-201ENST00000428678 509 ntBASIC19.42■□□□□ 0.7
LHX6Q9UPM6 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC19.42■□□□□ 0.7
LHX6Q9UPM6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LHX6Q9UPM6 AP003071.4-201ENST00000562276 1284 ntBASIC19.42■□□□□ 0.7
LHX6Q9UPM6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LHX6Q9UPM6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LHX6Q9UPM6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LHX6Q9UPM6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LHX6Q9UPM6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX6Q9UPM6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LHX6Q9UPM6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX6Q9UPM6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
LHX6Q9UPM6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX6Q9UPM6 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX6Q9UPM6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX6Q9UPM6 AC113347.1-201ENST00000413321 391 ntBASIC19.41■□□□□ 0.7
LHX6Q9UPM6 AC026396.1-201ENST00000419388 421 ntBASIC19.41■□□□□ 0.7
LHX6Q9UPM6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX6Q9UPM6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.41■□□□□ 0.7
LHX6Q9UPM6 RARRES2P10-201ENST00000564312 460 ntBASIC19.41■□□□□ 0.7
LHX6Q9UPM6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.41■□□□□ 0.7
LHX6Q9UPM6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.41■□□□□ 0.7
LHX6Q9UPM6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LHX6Q9UPM6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX6Q9UPM6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX6Q9UPM6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX6Q9UPM6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LHX6Q9UPM6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
LHX6Q9UPM6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LHX6Q9UPM6 AP006587.3-201ENST00000525742 1516 ntBASIC19.41■□□□□ 0.7
LHX6Q9UPM6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LHX6Q9UPM6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LHX6Q9UPM6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LHX6Q9UPM6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LHX6Q9UPM6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LHX6Q9UPM6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LHX6Q9UPM6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.4■□□□□ 0.7
LHX6Q9UPM6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.4■□□□□ 0.7
LHX6Q9UPM6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LHX6Q9UPM6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LHX6Q9UPM6 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LHX6Q9UPM6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
LHX6Q9UPM6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.4■□□□□ 0.7
LHX6Q9UPM6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.4■□□□□ 0.7
LHX6Q9UPM6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LHX6Q9UPM6 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms