Protein–RNA interactions for Protein: Q9UJK0

TSR3, Ribosome biogenesis protein TSR3 homolog, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3Q9UJK0 AC245052.3-201ENST00000450182 901 ntBASIC20.39■□□□□ 0.85
TSR3Q9UJK0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.39■□□□□ 0.85
TSR3Q9UJK0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.39■□□□□ 0.85
TSR3Q9UJK0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.39■□□□□ 0.85
TSR3Q9UJK0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TSR3Q9UJK0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TSR3Q9UJK0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TSR3Q9UJK0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TSR3Q9UJK0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TSR3Q9UJK0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TSR3Q9UJK0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TSR3Q9UJK0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TSR3Q9UJK0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.38■□□□□ 0.85
TSR3Q9UJK0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TSR3Q9UJK0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.38■□□□□ 0.85
TSR3Q9UJK0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TSR3Q9UJK0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TSR3Q9UJK0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TSR3Q9UJK0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.38■□□□□ 0.85
TSR3Q9UJK0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TSR3Q9UJK0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.38■□□□□ 0.85
TSR3Q9UJK0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.38■□□□□ 0.85
TSR3Q9UJK0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.38■□□□□ 0.85
TSR3Q9UJK0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TSR3Q9UJK0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
TSR3Q9UJK0 RARRES2P11-201ENST00000635158 484 ntBASIC20.38■□□□□ 0.85
TSR3Q9UJK0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TSR3Q9UJK0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TSR3Q9UJK0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TSR3Q9UJK0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TSR3Q9UJK0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TSR3Q9UJK0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TSR3Q9UJK0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.38■□□□□ 0.85
TSR3Q9UJK0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
TSR3Q9UJK0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TSR3Q9UJK0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TSR3Q9UJK0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.37■□□□□ 0.85
TSR3Q9UJK0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
TSR3Q9UJK0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TSR3Q9UJK0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TSR3Q9UJK0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TSR3Q9UJK0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.37■□□□□ 0.85
TSR3Q9UJK0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TSR3Q9UJK0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TSR3Q9UJK0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TSR3Q9UJK0 AC016769.1-201ENST00000409132 1010 ntBASIC20.37■□□□□ 0.85
TSR3Q9UJK0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TSR3Q9UJK0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.37■□□□□ 0.85
TSR3Q9UJK0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.37■□□□□ 0.85
TSR3Q9UJK0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TSR3Q9UJK0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.37■□□□□ 0.85
TSR3Q9UJK0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.37■□□□□ 0.85
TSR3Q9UJK0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.37■□□□□ 0.85
TSR3Q9UJK0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TSR3Q9UJK0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TSR3Q9UJK0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.36■□□□□ 0.85
TSR3Q9UJK0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.36■□□□□ 0.85
TSR3Q9UJK0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TSR3Q9UJK0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TSR3Q9UJK0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TSR3Q9UJK0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.36■□□□□ 0.85
TSR3Q9UJK0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.36■□□□□ 0.85
TSR3Q9UJK0 MYCNOS-205ENST00000641950 531 ntBASIC20.36■□□□□ 0.85
TSR3Q9UJK0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TSR3Q9UJK0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TSR3Q9UJK0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.36■□□□□ 0.85
TSR3Q9UJK0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TSR3Q9UJK0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
TSR3Q9UJK0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TSR3Q9UJK0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.35■□□□□ 0.85
TSR3Q9UJK0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.35■□□□□ 0.85
TSR3Q9UJK0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TSR3Q9UJK0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TSR3Q9UJK0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TSR3Q9UJK0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TSR3Q9UJK0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TSR3Q9UJK0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TSR3Q9UJK0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.35■□□□□ 0.85
TSR3Q9UJK0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.35■□□□□ 0.85
TSR3Q9UJK0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.35■□□□□ 0.85
TSR3Q9UJK0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.35■□□□□ 0.85
TSR3Q9UJK0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.35■□□□□ 0.85
TSR3Q9UJK0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.35■□□□□ 0.85
TSR3Q9UJK0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TSR3Q9UJK0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TSR3Q9UJK0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.35■□□□□ 0.85
TSR3Q9UJK0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.35■□□□□ 0.85
TSR3Q9UJK0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.35■□□□□ 0.85
TSR3Q9UJK0 AC006128.1-201ENST00000624704 1661 ntBASIC20.35■□□□□ 0.85
TSR3Q9UJK0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TSR3Q9UJK0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TSR3Q9UJK0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TSR3Q9UJK0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
TSR3Q9UJK0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TSR3Q9UJK0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.34■□□□□ 0.85
TSR3Q9UJK0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TSR3Q9UJK0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
TSR3Q9UJK0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
TSR3Q9UJK0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TSR3Q9UJK0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms