Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RIMS3Q9UJD0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIMS3Q9UJD0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIMS3Q9UJD0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIMS3Q9UJD0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RIMS3Q9UJD0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.46■□□□□ 0.71
RIMS3Q9UJD0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RIMS3Q9UJD0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIMS3Q9UJD0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIMS3Q9UJD0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RIMS3Q9UJD0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.46■□□□□ 0.71
RIMS3Q9UJD0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.46■□□□□ 0.71
RIMS3Q9UJD0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RIMS3Q9UJD0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.46■□□□□ 0.71
RIMS3Q9UJD0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
RIMS3Q9UJD0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIMS3Q9UJD0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIMS3Q9UJD0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.45■□□□□ 0.7
RIMS3Q9UJD0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RIMS3Q9UJD0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.45■□□□□ 0.7
RIMS3Q9UJD0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.45■□□□□ 0.7
RIMS3Q9UJD0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.45■□□□□ 0.7
RIMS3Q9UJD0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIMS3Q9UJD0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RIMS3Q9UJD0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.45■□□□□ 0.7
RIMS3Q9UJD0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.45■□□□□ 0.7
RIMS3Q9UJD0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.45■□□□□ 0.7
RIMS3Q9UJD0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.45■□□□□ 0.7
RIMS3Q9UJD0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIMS3Q9UJD0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIMS3Q9UJD0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIMS3Q9UJD0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.45■□□□□ 0.7
RIMS3Q9UJD0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.45■□□□□ 0.7
RIMS3Q9UJD0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIMS3Q9UJD0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RIMS3Q9UJD0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.45■□□□□ 0.7
RIMS3Q9UJD0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIMS3Q9UJD0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RIMS3Q9UJD0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RIMS3Q9UJD0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.45■□□□□ 0.7
RIMS3Q9UJD0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIMS3Q9UJD0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.44■□□□□ 0.7
RIMS3Q9UJD0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.44■□□□□ 0.7
RIMS3Q9UJD0 AL158211.5-201ENST00000623583 2518 ntBASIC19.44■□□□□ 0.7
RIMS3Q9UJD0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIMS3Q9UJD0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIMS3Q9UJD0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIMS3Q9UJD0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.44■□□□□ 0.7
RIMS3Q9UJD0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIMS3Q9UJD0 AL136116.3-201ENST00000402907 1138 ntBASIC19.44■□□□□ 0.7
RIMS3Q9UJD0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIMS3Q9UJD0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.44■□□□□ 0.7
RIMS3Q9UJD0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.44■□□□□ 0.7
RIMS3Q9UJD0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RIMS3Q9UJD0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.44■□□□□ 0.7
RIMS3Q9UJD0 AC004408.2-201ENST00000623613 2777 ntBASIC19.44■□□□□ 0.7
RIMS3Q9UJD0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RIMS3Q9UJD0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.44■□□□□ 0.7
RIMS3Q9UJD0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RIMS3Q9UJD0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RIMS3Q9UJD0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.43■□□□□ 0.7
RIMS3Q9UJD0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIMS3Q9UJD0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIMS3Q9UJD0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RIMS3Q9UJD0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
RIMS3Q9UJD0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RIMS3Q9UJD0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RIMS3Q9UJD0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RIMS3Q9UJD0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RIMS3Q9UJD0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.43■□□□□ 0.7
RIMS3Q9UJD0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RIMS3Q9UJD0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RIMS3Q9UJD0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIMS3Q9UJD0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RIMS3Q9UJD0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RIMS3Q9UJD0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIMS3Q9UJD0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.42■□□□□ 0.7
RIMS3Q9UJD0 AP006587.3-201ENST00000525742 1516 ntBASIC19.42■□□□□ 0.7
RIMS3Q9UJD0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RIMS3Q9UJD0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIMS3Q9UJD0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIMS3Q9UJD0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIMS3Q9UJD0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.42■□□□□ 0.7
RIMS3Q9UJD0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RIMS3Q9UJD0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.42■□□□□ 0.7
RIMS3Q9UJD0 BX842568.3-201ENST00000418104 571 ntBASIC19.42■□□□□ 0.7
RIMS3Q9UJD0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.42■□□□□ 0.7
RIMS3Q9UJD0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.42■□□□□ 0.7
RIMS3Q9UJD0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIMS3Q9UJD0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.42■□□□□ 0.7
RIMS3Q9UJD0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.42■□□□□ 0.7
RIMS3Q9UJD0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIMS3Q9UJD0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RIMS3Q9UJD0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RIMS3Q9UJD0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIMS3Q9UJD0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.42■□□□□ 0.7
RIMS3Q9UJD0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIMS3Q9UJD0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIMS3Q9UJD0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RIMS3Q9UJD0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms