Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
GDF3Q9NR23 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GDF3Q9NR23 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
GDF3Q9NR23 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
GDF3Q9NR23 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.69■■□□□ 1.06
GDF3Q9NR23 AC121338.2-201ENST00000622535 1744 ntBASIC21.69■■□□□ 1.06
GDF3Q9NR23 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GDF3Q9NR23 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GDF3Q9NR23 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.68■■□□□ 1.06
GDF3Q9NR23 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.68■■□□□ 1.06
GDF3Q9NR23 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GDF3Q9NR23 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.68■■□□□ 1.06
GDF3Q9NR23 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
GDF3Q9NR23 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.68■■□□□ 1.06
GDF3Q9NR23 ID1-201ENST00000376105 1233 ntBASIC21.68■■□□□ 1.06
GDF3Q9NR23 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.68■■□□□ 1.06
GDF3Q9NR23 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.68■■□□□ 1.06
GDF3Q9NR23 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.68■■□□□ 1.06
GDF3Q9NR23 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GDF3Q9NR23 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
GDF3Q9NR23 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GDF3Q9NR23 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GDF3Q9NR23 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.68■■□□□ 1.06
GDF3Q9NR23 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.67■■□□□ 1.06
GDF3Q9NR23 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.67■■□□□ 1.06
GDF3Q9NR23 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GDF3Q9NR23 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GDF3Q9NR23 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.67■■□□□ 1.06
GDF3Q9NR23 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
GDF3Q9NR23 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GDF3Q9NR23 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.67■■□□□ 1.06
GDF3Q9NR23 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.67■■□□□ 1.06
GDF3Q9NR23 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GDF3Q9NR23 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GDF3Q9NR23 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GDF3Q9NR23 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
GDF3Q9NR23 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
GDF3Q9NR23 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
GDF3Q9NR23 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GDF3Q9NR23 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GDF3Q9NR23 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.67■■□□□ 1.06
GDF3Q9NR23 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.67■■□□□ 1.06
GDF3Q9NR23 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.67■■□□□ 1.06
GDF3Q9NR23 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.67■■□□□ 1.06
GDF3Q9NR23 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GDF3Q9NR23 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
GDF3Q9NR23 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.66■■□□□ 1.06
GDF3Q9NR23 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
GDF3Q9NR23 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
GDF3Q9NR23 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.66■■□□□ 1.06
GDF3Q9NR23 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.66■■□□□ 1.06
GDF3Q9NR23 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.66■■□□□ 1.06
GDF3Q9NR23 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.66■■□□□ 1.06
GDF3Q9NR23 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.66■■□□□ 1.06
GDF3Q9NR23 TPRG1LP1-201ENST00000598702 760 ntBASIC21.66■■□□□ 1.06
GDF3Q9NR23 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
GDF3Q9NR23 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GDF3Q9NR23 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GDF3Q9NR23 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
GDF3Q9NR23 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GDF3Q9NR23 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.66■■□□□ 1.06
GDF3Q9NR23 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GDF3Q9NR23 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.65■■□□□ 1.06
GDF3Q9NR23 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
GDF3Q9NR23 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
GDF3Q9NR23 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
GDF3Q9NR23 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.65■■□□□ 1.06
GDF3Q9NR23 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GDF3Q9NR23 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GDF3Q9NR23 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GDF3Q9NR23 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GDF3Q9NR23 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GDF3Q9NR23 AC016769.1-201ENST00000409132 1010 ntBASIC21.65■■□□□ 1.06
GDF3Q9NR23 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GDF3Q9NR23 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.65■■□□□ 1.06
GDF3Q9NR23 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.65■■□□□ 1.06
GDF3Q9NR23 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.65■■□□□ 1.06
GDF3Q9NR23 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.65■■□□□ 1.06
GDF3Q9NR23 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.65■■□□□ 1.06
GDF3Q9NR23 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GDF3Q9NR23 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.65■■□□□ 1.06
GDF3Q9NR23 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
GDF3Q9NR23 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.65■■□□□ 1.06
GDF3Q9NR23 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.65■■□□□ 1.06
GDF3Q9NR23 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
GDF3Q9NR23 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.65■■□□□ 1.06
GDF3Q9NR23 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GDF3Q9NR23 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GDF3Q9NR23 AP006587.3-201ENST00000525742 1516 ntBASIC21.65■■□□□ 1.06
GDF3Q9NR23 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.65■■□□□ 1.06
GDF3Q9NR23 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.64■■□□□ 1.06
GDF3Q9NR23 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GDF3Q9NR23 AL512408.1-201ENST00000569378 2000 ntBASIC21.64■■□□□ 1.05
GDF3Q9NR23 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
GDF3Q9NR23 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GDF3Q9NR23 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GDF3Q9NR23 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.64■■□□□ 1.05
GDF3Q9NR23 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.64■■□□□ 1.05
GDF3Q9NR23 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
GDF3Q9NR23 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms