Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 AC106739.1-201ENST00000617035 715 ntBASIC19.51■□□□□ 0.71
SLC52A3Q9NQ40 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC52A3Q9NQ40 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC52A3Q9NQ40 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC52A3Q9NQ40 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.51■□□□□ 0.71
SLC52A3Q9NQ40 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC52A3Q9NQ40 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC52A3Q9NQ40 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.51■□□□□ 0.71
SLC52A3Q9NQ40 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC52A3Q9NQ40 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC52A3Q9NQ40 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC52A3Q9NQ40 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.5■□□□□ 0.71
SLC52A3Q9NQ40 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC52A3Q9NQ40 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC52A3Q9NQ40 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC52A3Q9NQ40 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SLC52A3Q9NQ40 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC52A3Q9NQ40 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC52A3Q9NQ40 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.5■□□□□ 0.71
SLC52A3Q9NQ40 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC52A3Q9NQ40 MIR2861-201ENST00000636310 90 ntBASIC19.5■□□□□ 0.71
SLC52A3Q9NQ40 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SLC52A3Q9NQ40 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC52A3Q9NQ40 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC52A3Q9NQ40 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC52A3Q9NQ40 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC52A3Q9NQ40 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SLC52A3Q9NQ40 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.5■□□□□ 0.71
SLC52A3Q9NQ40 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC52A3Q9NQ40 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.5■□□□□ 0.71
SLC52A3Q9NQ40 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC52A3Q9NQ40 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC52A3Q9NQ40 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC52A3Q9NQ40 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC52A3Q9NQ40 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SLC52A3Q9NQ40 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC52A3Q9NQ40 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC52A3Q9NQ40 RASA4CP-201ENST00000424092 1398 ntBASIC19.49■□□□□ 0.71
SLC52A3Q9NQ40 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC52A3Q9NQ40 EDA-201ENST00000338901 1233 ntBASIC19.49■□□□□ 0.71
SLC52A3Q9NQ40 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.49■□□□□ 0.71
SLC52A3Q9NQ40 MIR939-201ENST00000401314 82 ntBASIC19.49■□□□□ 0.71
SLC52A3Q9NQ40 POU5F1P4-201ENST00000413175 1085 ntBASIC19.49■□□□□ 0.71
SLC52A3Q9NQ40 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.49■□□□□ 0.71
SLC52A3Q9NQ40 PBX2P1-201ENST00000493219 1291 ntBASIC19.49■□□□□ 0.71
SLC52A3Q9NQ40 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC52A3Q9NQ40 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC52A3Q9NQ40 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC52A3Q9NQ40 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SLC52A3Q9NQ40 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC52A3Q9NQ40 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC52A3Q9NQ40 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC52A3Q9NQ40 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC52A3Q9NQ40 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC52A3Q9NQ40 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC52A3Q9NQ40 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC52A3Q9NQ40 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC52A3Q9NQ40 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.48■□□□□ 0.71
SLC52A3Q9NQ40 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC52A3Q9NQ40 AL031432.3-201ENST00000607698 485 ntBASIC19.48■□□□□ 0.71
SLC52A3Q9NQ40 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC52A3Q9NQ40 SMG8-203ENST00000578922 2178 ntBASIC19.48■□□□□ 0.71
SLC52A3Q9NQ40 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC52A3Q9NQ40 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC52A3Q9NQ40 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC52A3Q9NQ40 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC52A3Q9NQ40 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC52A3Q9NQ40 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
SLC52A3Q9NQ40 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SLC52A3Q9NQ40 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
SLC52A3Q9NQ40 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
SLC52A3Q9NQ40 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC52A3Q9NQ40 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC52A3Q9NQ40 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC52A3Q9NQ40 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC52A3Q9NQ40 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC52A3Q9NQ40 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.47■□□□□ 0.71
SLC52A3Q9NQ40 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC52A3Q9NQ40 AC096631.2-201ENST00000436136 790 ntBASIC19.47■□□□□ 0.71
SLC52A3Q9NQ40 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC52A3Q9NQ40 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC52A3Q9NQ40 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC52A3Q9NQ40 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC52A3Q9NQ40 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SLC52A3Q9NQ40 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC52A3Q9NQ40 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SLC52A3Q9NQ40 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC52A3Q9NQ40 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC52A3Q9NQ40 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC52A3Q9NQ40 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC52A3Q9NQ40 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC52A3Q9NQ40 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC52A3Q9NQ40 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC52A3Q9NQ40 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SLC52A3Q9NQ40 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.46■□□□□ 0.71
SLC52A3Q9NQ40 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC52A3Q9NQ40 AL136967.2-201ENST00000623968 743 ntBASIC19.46■□□□□ 0.71
SLC52A3Q9NQ40 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SLC52A3Q9NQ40 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SLC52A3Q9NQ40 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms