Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHD8Q9HCK8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHD8Q9HCK8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CHD8Q9HCK8 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHD8Q9HCK8 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHD8Q9HCK8 FDX1P1-201ENST00000449115 551 ntBASIC19.42■□□□□ 0.7
CHD8Q9HCK8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CHD8Q9HCK8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHD8Q9HCK8 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHD8Q9HCK8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.41■□□□□ 0.7
CHD8Q9HCK8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.41■□□□□ 0.7
CHD8Q9HCK8 ATP5G1P1-201ENST00000448724 379 ntBASIC19.41■□□□□ 0.7
CHD8Q9HCK8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.41■□□□□ 0.7
CHD8Q9HCK8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.41■□□□□ 0.7
CHD8Q9HCK8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHD8Q9HCK8 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHD8Q9HCK8 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CHD8Q9HCK8 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.41■□□□□ 0.7
CHD8Q9HCK8 AC246785.2-201ENST00000432512 513 ntBASIC19.41■□□□□ 0.7
CHD8Q9HCK8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHD8Q9HCK8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.41■□□□□ 0.7
CHD8Q9HCK8 LINC01238-205ENST00000567549 1107 ntBASIC19.4■□□□□ 0.7
CHD8Q9HCK8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.4■□□□□ 0.7
CHD8Q9HCK8 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.4■□□□□ 0.7
CHD8Q9HCK8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.4■□□□□ 0.7
CHD8Q9HCK8 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHD8Q9HCK8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.4■□□□□ 0.7
CHD8Q9HCK8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHD8Q9HCK8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.4■□□□□ 0.7
CHD8Q9HCK8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.4■□□□□ 0.7
CHD8Q9HCK8 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.4■□□□□ 0.7
CHD8Q9HCK8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHD8Q9HCK8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHD8Q9HCK8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.4■□□□□ 0.7
CHD8Q9HCK8 AL121749.1-202ENST00000609313 2153 ntBASIC19.4■□□□□ 0.7
CHD8Q9HCK8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHD8Q9HCK8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHD8Q9HCK8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHD8Q9HCK8 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.39■□□□□ 0.7
CHD8Q9HCK8 CDV3P1-201ENST00000471403 739 ntBASIC19.39■□□□□ 0.7
CHD8Q9HCK8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.39■□□□□ 0.7
CHD8Q9HCK8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHD8Q9HCK8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHD8Q9HCK8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHD8Q9HCK8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHD8Q9HCK8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHD8Q9HCK8 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHD8Q9HCK8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.39■□□□□ 0.69
CHD8Q9HCK8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CHD8Q9HCK8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CHD8Q9HCK8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.38■□□□□ 0.69
CHD8Q9HCK8 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD8Q9HCK8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD8Q9HCK8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHD8Q9HCK8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHD8Q9HCK8 FAM207BP-201ENST00000447172 505 ntBASIC19.38■□□□□ 0.69
CHD8Q9HCK8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.38■□□□□ 0.69
CHD8Q9HCK8 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CHD8Q9HCK8 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD8Q9HCK8 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CHD8Q9HCK8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD8Q9HCK8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.38■□□□□ 0.69
CHD8Q9HCK8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD8Q9HCK8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD8Q9HCK8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD8Q9HCK8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD8Q9HCK8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.38■□□□□ 0.69
CHD8Q9HCK8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.38■□□□□ 0.69
CHD8Q9HCK8 C2orf69P3-201ENST00000565542 1120 ntBASIC19.38■□□□□ 0.69
CHD8Q9HCK8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.38■□□□□ 0.69
CHD8Q9HCK8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD8Q9HCK8 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHD8Q9HCK8 AP003733.4-201ENST00000623785 1697 ntBASIC19.37■□□□□ 0.69
CHD8Q9HCK8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
CHD8Q9HCK8 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD8Q9HCK8 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.37■□□□□ 0.69
CHD8Q9HCK8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.37■□□□□ 0.69
CHD8Q9HCK8 NAPSB-206ENST00000562112 1266 ntBASIC19.37■□□□□ 0.69
CHD8Q9HCK8 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.37■□□□□ 0.69
CHD8Q9HCK8 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHD8Q9HCK8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CHD8Q9HCK8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHD8Q9HCK8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD8Q9HCK8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD8Q9HCK8 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHD8Q9HCK8 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CHD8Q9HCK8 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD8Q9HCK8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.37■□□□□ 0.69
CHD8Q9HCK8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD8Q9HCK8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD8Q9HCK8 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.36■□□□□ 0.69
CHD8Q9HCK8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.36■□□□□ 0.69
CHD8Q9HCK8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD8Q9HCK8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD8Q9HCK8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
CHD8Q9HCK8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD8Q9HCK8 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD8Q9HCK8 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.36■□□□□ 0.69
CHD8Q9HCK8 AC091799.1-201ENST00000422823 811 ntBASIC19.36■□□□□ 0.69
CHD8Q9HCK8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms