Protein–RNA interactions for Protein: Q9HCG8

CWC22, Pre-mRNA-splicing factor CWC22 homolog, humanhuman

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CWC22Q9HCG8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CWC22Q9HCG8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CWC22Q9HCG8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CWC22Q9HCG8 GABARAPL3-202ENST00000624044 1851 ntBASIC24.83■■□□□ 1.57
CWC22Q9HCG8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC24.83■■□□□ 1.57
CWC22Q9HCG8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CWC22Q9HCG8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
CWC22Q9HCG8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CWC22Q9HCG8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CWC22Q9HCG8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
CWC22Q9HCG8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CWC22Q9HCG8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC24.83■■□□□ 1.57
CWC22Q9HCG8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CWC22Q9HCG8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
CWC22Q9HCG8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC24.83■■□□□ 1.57
CWC22Q9HCG8 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CWC22Q9HCG8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.56
CWC22Q9HCG8 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CWC22Q9HCG8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CWC22Q9HCG8 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CWC22Q9HCG8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC24.82■■□□□ 1.56
CWC22Q9HCG8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CWC22Q9HCG8 AP001160.3-201ENST00000601484 763 ntBASIC24.82■■□□□ 1.56
CWC22Q9HCG8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC24.82■■□□□ 1.56
CWC22Q9HCG8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CWC22Q9HCG8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC24.82■■□□□ 1.56
CWC22Q9HCG8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CWC22Q9HCG8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC24.82■■□□□ 1.56
CWC22Q9HCG8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CWC22Q9HCG8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CWC22Q9HCG8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CWC22Q9HCG8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CWC22Q9HCG8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CWC22Q9HCG8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CWC22Q9HCG8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CWC22Q9HCG8 AC006128.1-201ENST00000624704 1661 ntBASIC24.81■■□□□ 1.56
CWC22Q9HCG8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
CWC22Q9HCG8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
CWC22Q9HCG8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CWC22Q9HCG8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CWC22Q9HCG8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC24.81■■□□□ 1.56
CWC22Q9HCG8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CWC22Q9HCG8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.81■■□□□ 1.56
CWC22Q9HCG8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
CWC22Q9HCG8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CWC22Q9HCG8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC24.81■■□□□ 1.56
CWC22Q9HCG8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC24.81■■□□□ 1.56
CWC22Q9HCG8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC24.81■■□□□ 1.56
CWC22Q9HCG8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CWC22Q9HCG8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC24.81■■□□□ 1.56
CWC22Q9HCG8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CWC22Q9HCG8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC24.81■■□□□ 1.56
CWC22Q9HCG8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CWC22Q9HCG8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CWC22Q9HCG8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
CWC22Q9HCG8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC24.8■■□□□ 1.56
CWC22Q9HCG8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CWC22Q9HCG8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CWC22Q9HCG8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC24.8■■□□□ 1.56
CWC22Q9HCG8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC24.8■■□□□ 1.56
CWC22Q9HCG8 TSPY6P-201ENST00000448518 926 ntBASIC24.8■■□□□ 1.56
CWC22Q9HCG8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC24.8■■□□□ 1.56
CWC22Q9HCG8 DUX4L16-201ENST00000555130 1264 ntBASIC24.8■■□□□ 1.56
CWC22Q9HCG8 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CWC22Q9HCG8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC24.8■■□□□ 1.56
CWC22Q9HCG8 AL050303.2-201ENST00000619798 666 ntBASIC24.8■■□□□ 1.56
CWC22Q9HCG8 MYCNOS-205ENST00000641950 531 ntBASIC24.8■■□□□ 1.56
CWC22Q9HCG8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC24.8■■□□□ 1.56
CWC22Q9HCG8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
CWC22Q9HCG8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CWC22Q9HCG8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC24.8■■□□□ 1.56
CWC22Q9HCG8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC24.8■■□□□ 1.56
CWC22Q9HCG8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CWC22Q9HCG8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CWC22Q9HCG8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CWC22Q9HCG8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
CWC22Q9HCG8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CWC22Q9HCG8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CWC22Q9HCG8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CWC22Q9HCG8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CWC22Q9HCG8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
CWC22Q9HCG8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CWC22Q9HCG8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC24.79■■□□□ 1.56
CWC22Q9HCG8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC24.79■■□□□ 1.56
CWC22Q9HCG8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
CWC22Q9HCG8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.79■■□□□ 1.56
CWC22Q9HCG8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC24.79■■□□□ 1.56
CWC22Q9HCG8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC24.79■■□□□ 1.56
CWC22Q9HCG8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
CWC22Q9HCG8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CWC22Q9HCG8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC24.79■■□□□ 1.56
CWC22Q9HCG8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CWC22Q9HCG8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC24.78■■□□□ 1.56
CWC22Q9HCG8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CWC22Q9HCG8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
CWC22Q9HCG8 AP005212.1-201ENST00000581547 1997 ntBASIC24.78■■□□□ 1.56
CWC22Q9HCG8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
CWC22Q9HCG8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CWC22Q9HCG8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CWC22Q9HCG8 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms