Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SND1-IT1Q9HBX3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC13.75□□□□□ -0.21
SND1-IT1Q9HBX3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC13.75□□□□□ -0.21
SND1-IT1Q9HBX3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SND1-IT1Q9HBX3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SND1-IT1Q9HBX3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC13.75□□□□□ -0.21
SND1-IT1Q9HBX3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
SND1-IT1Q9HBX3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SND1-IT1Q9HBX3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SND1-IT1Q9HBX3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SND1-IT1Q9HBX3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC13.75□□□□□ -0.21
SND1-IT1Q9HBX3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SND1-IT1Q9HBX3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SND1-IT1Q9HBX3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC13.74□□□□□ -0.21
SND1-IT1Q9HBX3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SND1-IT1Q9HBX3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SND1-IT1Q9HBX3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SND1-IT1Q9HBX3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC13.74□□□□□ -0.21
SND1-IT1Q9HBX3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SND1-IT1Q9HBX3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SND1-IT1Q9HBX3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
SND1-IT1Q9HBX3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SND1-IT1Q9HBX3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SND1-IT1Q9HBX3 UNC93B8-201ENST00000511903 705 ntBASIC13.74□□□□□ -0.21
SND1-IT1Q9HBX3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC13.74□□□□□ -0.21
SND1-IT1Q9HBX3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SND1-IT1Q9HBX3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC13.74□□□□□ -0.21
SND1-IT1Q9HBX3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SND1-IT1Q9HBX3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC13.74□□□□□ -0.21
SND1-IT1Q9HBX3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SND1-IT1Q9HBX3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SND1-IT1Q9HBX3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SND1-IT1Q9HBX3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SND1-IT1Q9HBX3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SND1-IT1Q9HBX3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC13.74□□□□□ -0.21
SND1-IT1Q9HBX3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC13.73□□□□□ -0.21
SND1-IT1Q9HBX3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC13.73□□□□□ -0.21
SND1-IT1Q9HBX3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SND1-IT1Q9HBX3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
SND1-IT1Q9HBX3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SND1-IT1Q9HBX3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SND1-IT1Q9HBX3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC13.73□□□□□ -0.21
SND1-IT1Q9HBX3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SND1-IT1Q9HBX3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SND1-IT1Q9HBX3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SND1-IT1Q9HBX3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC13.73□□□□□ -0.21
SND1-IT1Q9HBX3 AC009299.2-201ENST00000482477 511 ntBASIC13.73□□□□□ -0.21
SND1-IT1Q9HBX3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC13.73□□□□□ -0.21
SND1-IT1Q9HBX3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SND1-IT1Q9HBX3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
SND1-IT1Q9HBX3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SND1-IT1Q9HBX3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC13.73□□□□□ -0.21
SND1-IT1Q9HBX3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC13.73□□□□□ -0.21
SND1-IT1Q9HBX3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SND1-IT1Q9HBX3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SND1-IT1Q9HBX3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC13.73□□□□□ -0.21
SND1-IT1Q9HBX3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SND1-IT1Q9HBX3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SND1-IT1Q9HBX3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC13.73□□□□□ -0.21
SND1-IT1Q9HBX3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SND1-IT1Q9HBX3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SND1-IT1Q9HBX3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SND1-IT1Q9HBX3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 AC112907.3-201ENST00000577781 2400 ntBASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 BCL2-203ENST00000589955 5011 ntBASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 AC010525.1-201ENST00000585559 441 ntBASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 AC092171.4-201ENST00000609130 632 ntBASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 SMG8-203ENST00000578922 2178 ntBASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SND1-IT1Q9HBX3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
SND1-IT1Q9HBX3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC13.71□□□□□ -0.21
SND1-IT1Q9HBX3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SND1-IT1Q9HBX3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms