Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGQ9H9S0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGQ9H9S0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.49■□□□□ 0.71
NANOGQ9H9S0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGQ9H9S0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
NANOGQ9H9S0 AL136116.3-201ENST00000402907 1138 ntBASIC19.49■□□□□ 0.71
NANOGQ9H9S0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.49■□□□□ 0.71
NANOGQ9H9S0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.49■□□□□ 0.71
NANOGQ9H9S0 AC024257.2-201ENST00000549699 147 ntBASIC19.49■□□□□ 0.71
NANOGQ9H9S0 EEF1DP3-203ENST00000566025 782 ntBASIC19.49■□□□□ 0.71
NANOGQ9H9S0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.49■□□□□ 0.71
NANOGQ9H9S0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGQ9H9S0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGQ9H9S0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGQ9H9S0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGQ9H9S0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGQ9H9S0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
NANOGQ9H9S0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGQ9H9S0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGQ9H9S0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NANOGQ9H9S0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NANOGQ9H9S0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NANOGQ9H9S0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.48■□□□□ 0.71
NANOGQ9H9S0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NANOGQ9H9S0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NANOGQ9H9S0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.48■□□□□ 0.71
NANOGQ9H9S0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.48■□□□□ 0.71
NANOGQ9H9S0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NANOGQ9H9S0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.48■□□□□ 0.71
NANOGQ9H9S0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.48■□□□□ 0.71
NANOGQ9H9S0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NANOGQ9H9S0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.48■□□□□ 0.71
NANOGQ9H9S0 AC053503.5-201ENST00000601508 636 ntBASIC19.48■□□□□ 0.71
NANOGQ9H9S0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NANOGQ9H9S0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NANOGQ9H9S0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NANOGQ9H9S0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NANOGQ9H9S0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NANOGQ9H9S0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
NANOGQ9H9S0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.48■□□□□ 0.71
NANOGQ9H9S0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.48■□□□□ 0.71
NANOGQ9H9S0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NANOGQ9H9S0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NANOGQ9H9S0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NANOGQ9H9S0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.47■□□□□ 0.71
NANOGQ9H9S0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.47■□□□□ 0.71
NANOGQ9H9S0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
NANOGQ9H9S0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
NANOGQ9H9S0 AC092720.2-201ENST00000602388 1665 ntBASIC19.47■□□□□ 0.71
NANOGQ9H9S0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.47■□□□□ 0.71
NANOGQ9H9S0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
NANOGQ9H9S0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.47■□□□□ 0.71
NANOGQ9H9S0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
NANOGQ9H9S0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.47■□□□□ 0.71
NANOGQ9H9S0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NANOGQ9H9S0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.47■□□□□ 0.71
NANOGQ9H9S0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NANOGQ9H9S0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NANOGQ9H9S0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NANOGQ9H9S0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NANOGQ9H9S0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NANOGQ9H9S0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NANOGQ9H9S0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.46■□□□□ 0.71
NANOGQ9H9S0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NANOGQ9H9S0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.46■□□□□ 0.71
NANOGQ9H9S0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NANOGQ9H9S0 AL020996.1-203ENST00000536896 2307 ntBASIC19.46■□□□□ 0.71
NANOGQ9H9S0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.46■□□□□ 0.71
NANOGQ9H9S0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
NANOGQ9H9S0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.46■□□□□ 0.71
NANOGQ9H9S0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.46■□□□□ 0.71
NANOGQ9H9S0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.46■□□□□ 0.71
NANOGQ9H9S0 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.46■□□□□ 0.71
NANOGQ9H9S0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NANOGQ9H9S0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NANOGQ9H9S0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.46■□□□□ 0.71
NANOGQ9H9S0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
NANOGQ9H9S0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
NANOGQ9H9S0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NANOGQ9H9S0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
NANOGQ9H9S0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.46■□□□□ 0.71
NANOGQ9H9S0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.46■□□□□ 0.7
NANOGQ9H9S0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NANOGQ9H9S0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
NANOGQ9H9S0 TCF3P1-201ENST00000423021 1937 ntBASIC19.45■□□□□ 0.7
NANOGQ9H9S0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NANOGQ9H9S0 AC008764.7-201ENST00000593779 1081 ntBASIC19.45■□□□□ 0.7
NANOGQ9H9S0 AL136162.1-201ENST00000607711 1078 ntBASIC19.45■□□□□ 0.7
NANOGQ9H9S0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NANOGQ9H9S0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NANOGQ9H9S0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
NANOGQ9H9S0 TSPY26P-201ENST00000476365 1326 ntBASIC19.45■□□□□ 0.7
NANOGQ9H9S0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NANOGQ9H9S0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.45■□□□□ 0.7
NANOGQ9H9S0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.44■□□□□ 0.7
NANOGQ9H9S0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NANOGQ9H9S0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NANOGQ9H9S0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.44■□□□□ 0.7
NANOGQ9H9S0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
NANOGQ9H9S0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms