Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
PTPN23Q9H3S7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
PTPN23Q9H3S7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC31.23■■■□□ 2.59
PTPN23Q9H3S7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC31.23■■■□□ 2.59
PTPN23Q9H3S7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC31.23■■■□□ 2.59
PTPN23Q9H3S7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC31.23■■■□□ 2.59
PTPN23Q9H3S7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
PTPN23Q9H3S7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC31.22■■■□□ 2.59
PTPN23Q9H3S7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
PTPN23Q9H3S7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PTPN23Q9H3S7 PGM5P4-201ENST00000421970 445 ntBASIC31.22■■■□□ 2.59
PTPN23Q9H3S7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
PTPN23Q9H3S7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
PTPN23Q9H3S7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
PTPN23Q9H3S7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC31.22■■■□□ 2.59
PTPN23Q9H3S7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC31.22■■■□□ 2.59
PTPN23Q9H3S7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
PTPN23Q9H3S7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
PTPN23Q9H3S7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
PTPN23Q9H3S7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
PTPN23Q9H3S7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC31.21■■■□□ 2.59
PTPN23Q9H3S7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC31.21■■■□□ 2.59
PTPN23Q9H3S7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
PTPN23Q9H3S7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC31.21■■■□□ 2.59
PTPN23Q9H3S7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
PTPN23Q9H3S7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
PTPN23Q9H3S7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC31.2■■■□□ 2.59
PTPN23Q9H3S7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC31.2■■■□□ 2.59
PTPN23Q9H3S7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC31.2■■■□□ 2.59
PTPN23Q9H3S7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC31.2■■■□□ 2.59
PTPN23Q9H3S7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC31.2■■■□□ 2.59
PTPN23Q9H3S7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC31.2■■■□□ 2.58
PTPN23Q9H3S7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
PTPN23Q9H3S7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC31.2■■■□□ 2.58
PTPN23Q9H3S7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
PTPN23Q9H3S7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
PTPN23Q9H3S7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC31.2■■■□□ 2.58
PTPN23Q9H3S7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
PTPN23Q9H3S7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC31.2■■■□□ 2.58
PTPN23Q9H3S7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
PTPN23Q9H3S7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC31.2■■■□□ 2.58
PTPN23Q9H3S7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PTPN23Q9H3S7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
PTPN23Q9H3S7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
PTPN23Q9H3S7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PTPN23Q9H3S7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PTPN23Q9H3S7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PTPN23Q9H3S7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC31.19■■■□□ 2.58
PTPN23Q9H3S7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PTPN23Q9H3S7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
PTPN23Q9H3S7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
PTPN23Q9H3S7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
PTPN23Q9H3S7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC31.18■■■□□ 2.58
PTPN23Q9H3S7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC31.18■■■□□ 2.58
PTPN23Q9H3S7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
PTPN23Q9H3S7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
PTPN23Q9H3S7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC31.18■■■□□ 2.58
PTPN23Q9H3S7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC31.18■■■□□ 2.58
PTPN23Q9H3S7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
PTPN23Q9H3S7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
PTPN23Q9H3S7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
PTPN23Q9H3S7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
PTPN23Q9H3S7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
PTPN23Q9H3S7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC31.17■■■□□ 2.58
PTPN23Q9H3S7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC31.17■■■□□ 2.58
PTPN23Q9H3S7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC31.17■■■□□ 2.58
PTPN23Q9H3S7 FBXW4P1-201ENST00000426721 2239 ntBASIC31.17■■■□□ 2.58
PTPN23Q9H3S7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
PTPN23Q9H3S7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
PTPN23Q9H3S7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC31.16■■■□□ 2.58
PTPN23Q9H3S7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC31.16■■■□□ 2.58
PTPN23Q9H3S7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC31.16■■■□□ 2.58
PTPN23Q9H3S7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
PTPN23Q9H3S7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC31.16■■■□□ 2.58
PTPN23Q9H3S7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC31.16■■■□□ 2.58
PTPN23Q9H3S7 AL024507.2-201ENST00000606070 2574 ntBASIC31.16■■■□□ 2.58
PTPN23Q9H3S7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC31.16■■■□□ 2.58
PTPN23Q9H3S7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC31.16■■■□□ 2.58
PTPN23Q9H3S7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC31.16■■■□□ 2.58
PTPN23Q9H3S7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC31.16■■■□□ 2.58
PTPN23Q9H3S7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
PTPN23Q9H3S7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
PTPN23Q9H3S7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
PTPN23Q9H3S7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PTPN23Q9H3S7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC31.15■■■□□ 2.58
PTPN23Q9H3S7 OR2A1-AS1-207ENST00000486094 819 ntBASIC31.15■■■□□ 2.58
PTPN23Q9H3S7 AC142381.4-202ENST00000563973 229 ntBASIC31.15■■■□□ 2.58
PTPN23Q9H3S7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC31.15■■■□□ 2.58
PTPN23Q9H3S7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC31.15■■■□□ 2.58
PTPN23Q9H3S7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
PTPN23Q9H3S7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
PTPN23Q9H3S7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
PTPN23Q9H3S7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC31.14■■■□□ 2.58
PTPN23Q9H3S7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
PTPN23Q9H3S7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
PTPN23Q9H3S7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC31.14■■■□□ 2.58
PTPN23Q9H3S7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
PTPN23Q9H3S7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC31.14■■■□□ 2.58
PTPN23Q9H3S7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC31.14■■■□□ 2.58
PTPN23Q9H3S7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms