Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NELFAQ9H3P2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
NELFAQ9H3P2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NELFAQ9H3P2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NELFAQ9H3P2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NELFAQ9H3P2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.29■□□□□ 0.52
NELFAQ9H3P2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NELFAQ9H3P2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NELFAQ9H3P2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NELFAQ9H3P2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.29■□□□□ 0.52
NELFAQ9H3P2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
NELFAQ9H3P2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.29■□□□□ 0.52
NELFAQ9H3P2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.29■□□□□ 0.52
NELFAQ9H3P2 RAP2CP1-201ENST00000605103 478 ntBASIC18.29■□□□□ 0.52
NELFAQ9H3P2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
NELFAQ9H3P2 RARRES2P11-201ENST00000635158 484 ntBASIC18.29■□□□□ 0.52
NELFAQ9H3P2 AC073111.5-205ENST00000641717 521 ntBASIC18.29■□□□□ 0.52
NELFAQ9H3P2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NELFAQ9H3P2 RBM17P2-201ENST00000616397 1405 ntBASIC18.29■□□□□ 0.52
NELFAQ9H3P2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NELFAQ9H3P2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.29■□□□□ 0.52
NELFAQ9H3P2 AC121338.2-201ENST00000622535 1744 ntBASIC18.29■□□□□ 0.52
NELFAQ9H3P2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
NELFAQ9H3P2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
NELFAQ9H3P2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.28■□□□□ 0.52
NELFAQ9H3P2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.28■□□□□ 0.52
NELFAQ9H3P2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NELFAQ9H3P2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NELFAQ9H3P2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
NELFAQ9H3P2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.28■□□□□ 0.52
NELFAQ9H3P2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.28■□□□□ 0.52
NELFAQ9H3P2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NELFAQ9H3P2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NELFAQ9H3P2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
NELFAQ9H3P2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NELFAQ9H3P2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.28■□□□□ 0.52
NELFAQ9H3P2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.28■□□□□ 0.52
NELFAQ9H3P2 CNN2P6-201ENST00000439038 900 ntBASIC18.28■□□□□ 0.52
NELFAQ9H3P2 CDCA4P2-201ENST00000441182 718 ntBASIC18.28■□□□□ 0.52
NELFAQ9H3P2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NELFAQ9H3P2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.28■□□□□ 0.52
NELFAQ9H3P2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
NELFAQ9H3P2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NELFAQ9H3P2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
NELFAQ9H3P2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NELFAQ9H3P2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.28■□□□□ 0.52
NELFAQ9H3P2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NELFAQ9H3P2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.28■□□□□ 0.52
NELFAQ9H3P2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NELFAQ9H3P2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NELFAQ9H3P2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NELFAQ9H3P2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
NELFAQ9H3P2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NELFAQ9H3P2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NELFAQ9H3P2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.27■□□□□ 0.52
NELFAQ9H3P2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.27■□□□□ 0.52
NELFAQ9H3P2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NELFAQ9H3P2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NELFAQ9H3P2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NELFAQ9H3P2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.27■□□□□ 0.52
NELFAQ9H3P2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.27■□□□□ 0.52
NELFAQ9H3P2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
NELFAQ9H3P2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.27■□□□□ 0.52
NELFAQ9H3P2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NELFAQ9H3P2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NELFAQ9H3P2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NELFAQ9H3P2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
NELFAQ9H3P2 AC006128.1-201ENST00000624704 1661 ntBASIC18.27■□□□□ 0.52
NELFAQ9H3P2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
NELFAQ9H3P2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
NELFAQ9H3P2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NELFAQ9H3P2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
NELFAQ9H3P2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.27■□□□□ 0.51
NELFAQ9H3P2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.27■□□□□ 0.51
NELFAQ9H3P2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
NELFAQ9H3P2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NELFAQ9H3P2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NELFAQ9H3P2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NELFAQ9H3P2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NELFAQ9H3P2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.26■□□□□ 0.51
NELFAQ9H3P2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NELFAQ9H3P2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NELFAQ9H3P2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.26■□□□□ 0.51
NELFAQ9H3P2 TERF1P5-201ENST00000477545 1207 ntBASIC18.26■□□□□ 0.51
NELFAQ9H3P2 AC243732.1-201ENST00000612648 864 ntBASIC18.26■□□□□ 0.51
NELFAQ9H3P2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.26■□□□□ 0.51
NELFAQ9H3P2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NELFAQ9H3P2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.26■□□□□ 0.51
NELFAQ9H3P2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.26■□□□□ 0.51
NELFAQ9H3P2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.26■□□□□ 0.51
NELFAQ9H3P2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NELFAQ9H3P2 PLK5-205ENST00000642079 1969 ntBASIC18.26■□□□□ 0.51
NELFAQ9H3P2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NELFAQ9H3P2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
NELFAQ9H3P2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NELFAQ9H3P2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NELFAQ9H3P2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NELFAQ9H3P2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NELFAQ9H3P2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NELFAQ9H3P2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms