Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF39Q9H2S5 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RNF39Q9H2S5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC22.59■■□□□ 1.21
RNF39Q9H2S5 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC22.59■■□□□ 1.21
RNF39Q9H2S5 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC22.59■■□□□ 1.21
RNF39Q9H2S5 ATG10-IT1-201ENST00000396880 487 ntBASIC22.59■■□□□ 1.21
RNF39Q9H2S5 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.59■■□□□ 1.21
RNF39Q9H2S5 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC22.59■■□□□ 1.21
RNF39Q9H2S5 AC073611.1-201ENST00000550263 647 ntTSL 2 BASIC22.59■■□□□ 1.21
RNF39Q9H2S5 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.59■■□□□ 1.21
RNF39Q9H2S5 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RNF39Q9H2S5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF39Q9H2S5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RNF39Q9H2S5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RNF39Q9H2S5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
RNF39Q9H2S5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.58■■□□□ 1.21
RNF39Q9H2S5 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
RNF39Q9H2S5 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC22.58■■□□□ 1.21
RNF39Q9H2S5 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RNF39Q9H2S5 AL355472.2-201ENST00000422958 438 ntBASIC22.58■■□□□ 1.21
RNF39Q9H2S5 VN1R53P-201ENST00000429536 957 ntBASIC22.58■■□□□ 1.21
RNF39Q9H2S5 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC22.58■■□□□ 1.21
RNF39Q9H2S5 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC22.58■■□□□ 1.21
RNF39Q9H2S5 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC22.58■■□□□ 1.21
RNF39Q9H2S5 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RNF39Q9H2S5 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.58■■□□□ 1.21
RNF39Q9H2S5 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
RNF39Q9H2S5 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC22.58■■□□□ 1.21
RNF39Q9H2S5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RNF39Q9H2S5 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RNF39Q9H2S5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.58■■□□□ 1.2
RNF39Q9H2S5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
RNF39Q9H2S5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.57■■□□□ 1.2
RNF39Q9H2S5 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.57■■□□□ 1.2
RNF39Q9H2S5 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF39Q9H2S5 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF39Q9H2S5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
RNF39Q9H2S5 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF39Q9H2S5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF39Q9H2S5 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF39Q9H2S5 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF39Q9H2S5 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.57■■□□□ 1.2
RNF39Q9H2S5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC22.57■■□□□ 1.2
RNF39Q9H2S5 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC22.57■■□□□ 1.2
RNF39Q9H2S5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RNF39Q9H2S5 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RNF39Q9H2S5 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF39Q9H2S5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.57■■□□□ 1.2
RNF39Q9H2S5 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
RNF39Q9H2S5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF39Q9H2S5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.56■■□□□ 1.2
RNF39Q9H2S5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.56■■□□□ 1.2
RNF39Q9H2S5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF39Q9H2S5 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RNF39Q9H2S5 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.56■■□□□ 1.2
RNF39Q9H2S5 AC118282.1-201ENST00000506408 765 ntBASIC22.56■■□□□ 1.2
RNF39Q9H2S5 AC068205.1-201ENST00000526615 689 ntTSL 3 BASIC22.56■■□□□ 1.2
RNF39Q9H2S5 ISCU-212ENST00000547005 795 ntTSL 3 BASIC22.56■■□□□ 1.2
RNF39Q9H2S5 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.56■■□□□ 1.2
RNF39Q9H2S5 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.56■■□□□ 1.2
RNF39Q9H2S5 AC083880.1-201ENST00000608266 535 ntBASIC22.56■■□□□ 1.2
RNF39Q9H2S5 AC109809.1-201ENST00000619665 545 ntBASIC22.56■■□□□ 1.2
RNF39Q9H2S5 TBCB-214ENST00000629269 413 ntTSL 5 BASIC22.56■■□□□ 1.2
RNF39Q9H2S5 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RNF39Q9H2S5 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC22.56■■□□□ 1.2
RNF39Q9H2S5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF39Q9H2S5 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.56■■□□□ 1.2
RNF39Q9H2S5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF39Q9H2S5 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF39Q9H2S5 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF39Q9H2S5 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
RNF39Q9H2S5 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF39Q9H2S5 EP400NL-214ENST00000641289 2402 ntBASIC22.55■■□□□ 1.2
RNF39Q9H2S5 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF39Q9H2S5 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.55■■□□□ 1.2
RNF39Q9H2S5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC22.55■■□□□ 1.2
RNF39Q9H2S5 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.55■■□□□ 1.2
RNF39Q9H2S5 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.55■■□□□ 1.2
RNF39Q9H2S5 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF39Q9H2S5 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.55■■□□□ 1.2
RNF39Q9H2S5 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC22.55■■□□□ 1.2
RNF39Q9H2S5 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC22.55■■□□□ 1.2
RNF39Q9H2S5 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC22.55■■□□□ 1.2
RNF39Q9H2S5 FAM21FP-204ENST00000608637 956 ntBASIC22.55■■□□□ 1.2
RNF39Q9H2S5 AP000280.1-201ENST00000624800 832 ntBASIC22.55■■□□□ 1.2
RNF39Q9H2S5 MYC-209ENST00000641252 345 ntBASIC22.55■■□□□ 1.2
RNF39Q9H2S5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF39Q9H2S5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.55■■□□□ 1.2
RNF39Q9H2S5 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
RNF39Q9H2S5 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF39Q9H2S5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RNF39Q9H2S5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.54■■□□□ 1.2
RNF39Q9H2S5 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RNF39Q9H2S5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC22.54■■□□□ 1.2
RNF39Q9H2S5 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC22.54■■□□□ 1.2
RNF39Q9H2S5 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.54■■□□□ 1.2
RNF39Q9H2S5 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC22.54■■□□□ 1.2
RNF39Q9H2S5 PRELID3BP7-201ENST00000503606 469 ntBASIC22.54■■□□□ 1.2
RNF39Q9H2S5 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC22.54■■□□□ 1.2
RNF39Q9H2S5 AC012309.1-203ENST00000585860 965 ntTSL 5 BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms