Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
VPS33BQ9H267 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC25■■□□□ 1.59
VPS33BQ9H267 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC25■■□□□ 1.59
VPS33BQ9H267 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
VPS33BQ9H267 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC25■■□□□ 1.59
VPS33BQ9H267 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
VPS33BQ9H267 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
VPS33BQ9H267 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
VPS33BQ9H267 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
VPS33BQ9H267 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
VPS33BQ9H267 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
VPS33BQ9H267 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
VPS33BQ9H267 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC24.99■■□□□ 1.59
VPS33BQ9H267 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
VPS33BQ9H267 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
VPS33BQ9H267 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC24.99■■□□□ 1.59
VPS33BQ9H267 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
VPS33BQ9H267 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC24.99■■□□□ 1.59
VPS33BQ9H267 AL355075.4-201ENST00000554988 638 ntBASIC24.99■■□□□ 1.59
VPS33BQ9H267 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
VPS33BQ9H267 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
VPS33BQ9H267 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
VPS33BQ9H267 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC24.98■■□□□ 1.59
VPS33BQ9H267 RCN1P1-201ENST00000400413 996 ntBASIC24.98■■□□□ 1.59
VPS33BQ9H267 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC24.98■■□□□ 1.59
VPS33BQ9H267 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC24.98■■□□□ 1.59
VPS33BQ9H267 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
VPS33BQ9H267 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC24.98■■□□□ 1.59
VPS33BQ9H267 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
VPS33BQ9H267 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
VPS33BQ9H267 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
VPS33BQ9H267 FAM99A-202ENST00000538190 1989 ntBASIC24.98■■□□□ 1.59
VPS33BQ9H267 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
VPS33BQ9H267 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
VPS33BQ9H267 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC24.97■■□□□ 1.59
VPS33BQ9H267 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC24.97■■□□□ 1.59
VPS33BQ9H267 MOK-233ENST00000524214 1539 ntTSL 2 BASIC24.97■■□□□ 1.59
VPS33BQ9H267 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
VPS33BQ9H267 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
VPS33BQ9H267 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.97■■□□□ 1.59
VPS33BQ9H267 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
VPS33BQ9H267 PENK-204ENST00000518770 863 ntTSL 2 BASIC24.97■■□□□ 1.59
VPS33BQ9H267 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC24.97■■□□□ 1.59
VPS33BQ9H267 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC24.97■■□□□ 1.59
VPS33BQ9H267 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC24.97■■□□□ 1.59
VPS33BQ9H267 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
VPS33BQ9H267 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
VPS33BQ9H267 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
VPS33BQ9H267 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC24.97■■□□□ 1.59
VPS33BQ9H267 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
VPS33BQ9H267 AC080038.3-201ENST00000623346 1952 ntBASIC24.96■■□□□ 1.59
VPS33BQ9H267 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
VPS33BQ9H267 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC24.96■■□□□ 1.59
VPS33BQ9H267 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
VPS33BQ9H267 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
VPS33BQ9H267 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
VPS33BQ9H267 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
VPS33BQ9H267 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC24.96■■□□□ 1.59
VPS33BQ9H267 PPOX-219ENST00000544598 813 ntTSL 2 BASIC24.96■■□□□ 1.59
VPS33BQ9H267 AL356652.1-201ENST00000615962 565 ntBASIC24.96■■□□□ 1.59
VPS33BQ9H267 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
VPS33BQ9H267 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
VPS33BQ9H267 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.96■■□□□ 1.59
VPS33BQ9H267 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
VPS33BQ9H267 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.59
VPS33BQ9H267 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.59
VPS33BQ9H267 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.59
VPS33BQ9H267 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.95■■□□□ 1.58
VPS33BQ9H267 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC24.95■■□□□ 1.58
VPS33BQ9H267 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC24.95■■□□□ 1.58
VPS33BQ9H267 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
VPS33BQ9H267 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
VPS33BQ9H267 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
VPS33BQ9H267 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
VPS33BQ9H267 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC24.95■■□□□ 1.58
VPS33BQ9H267 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
VPS33BQ9H267 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC24.95■■□□□ 1.58
VPS33BQ9H267 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
VPS33BQ9H267 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
VPS33BQ9H267 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
VPS33BQ9H267 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC24.94■■□□□ 1.58
VPS33BQ9H267 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
VPS33BQ9H267 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
VPS33BQ9H267 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC24.94■■□□□ 1.58
VPS33BQ9H267 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC24.94■■□□□ 1.58
VPS33BQ9H267 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
VPS33BQ9H267 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
VPS33BQ9H267 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC24.94■■□□□ 1.58
VPS33BQ9H267 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
VPS33BQ9H267 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
VPS33BQ9H267 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC24.94■■□□□ 1.58
VPS33BQ9H267 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC24.94■■□□□ 1.58
VPS33BQ9H267 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
VPS33BQ9H267 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
VPS33BQ9H267 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
VPS33BQ9H267 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
VPS33BQ9H267 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
VPS33BQ9H267 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
VPS33BQ9H267 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
VPS33BQ9H267 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms