Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 AC012676.1-201ENST00000574705 1949 ntBASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 GOLGA2P6-201ENST00000340929 2049 ntBASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 AC026310.3-201ENST00000625186 2373 ntBASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 AC006058.3-201ENST00000606217 1069 ntBASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC7.01□□□□□ -1.29
KRTAP4-3Q9BYR4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 KRT18P29-201ENST00000397031 1267 ntBASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 SERPINH1P1-201ENST00000419794 1249 ntBASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 AC007322.3-201ENST00000426526 701 ntBASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 AL158047.1-201ENST00000445918 881 ntBASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 AC008403.3-201ENST00000598924 454 ntBASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
KRTAP4-3Q9BYR4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
KRTAP4-3Q9BYR4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
KRTAP4-3Q9BYR4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
KRTAP4-3Q9BYR4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
KRTAP4-3Q9BYR4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
KRTAP4-3Q9BYR4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC6.99□□□□□ -1.29
KRTAP4-3Q9BYR4 CYP21A1P-202ENST00000354927 1481 ntBASIC6.99□□□□□ -1.29
KRTAP4-3Q9BYR4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
KRTAP4-3Q9BYR4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC6.99□□□□□ -1.29
KRTAP4-3Q9BYR4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms