Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.62■□□□□ 0.73
THUMPD3Q9BV44 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
THUMPD3Q9BV44 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
THUMPD3Q9BV44 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
THUMPD3Q9BV44 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.61■□□□□ 0.73
THUMPD3Q9BV44 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
THUMPD3Q9BV44 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
THUMPD3Q9BV44 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.61■□□□□ 0.73
THUMPD3Q9BV44 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
THUMPD3Q9BV44 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
THUMPD3Q9BV44 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
THUMPD3Q9BV44 AC105233.4-201ENST00000642045 216 ntBASIC19.61■□□□□ 0.73
THUMPD3Q9BV44 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.61■□□□□ 0.73
THUMPD3Q9BV44 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
THUMPD3Q9BV44 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
THUMPD3Q9BV44 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
THUMPD3Q9BV44 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
THUMPD3Q9BV44 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
THUMPD3Q9BV44 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
THUMPD3Q9BV44 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.6■□□□□ 0.73
THUMPD3Q9BV44 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
THUMPD3Q9BV44 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.6■□□□□ 0.73
THUMPD3Q9BV44 AFG3L1P-217ENST00000557444 2447 ntBASIC19.6■□□□□ 0.73
THUMPD3Q9BV44 MIR572-201ENST00000384983 95 ntBASIC19.6■□□□□ 0.73
THUMPD3Q9BV44 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.6■□□□□ 0.73
THUMPD3Q9BV44 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
THUMPD3Q9BV44 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.6■□□□□ 0.73
THUMPD3Q9BV44 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
THUMPD3Q9BV44 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
THUMPD3Q9BV44 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
THUMPD3Q9BV44 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
THUMPD3Q9BV44 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
THUMPD3Q9BV44 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
THUMPD3Q9BV44 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
THUMPD3Q9BV44 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
THUMPD3Q9BV44 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
THUMPD3Q9BV44 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
THUMPD3Q9BV44 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
THUMPD3Q9BV44 AC005224.4-201ENST00000583262 1652 ntBASIC19.59■□□□□ 0.73
THUMPD3Q9BV44 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
THUMPD3Q9BV44 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
THUMPD3Q9BV44 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.59■□□□□ 0.73
THUMPD3Q9BV44 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.59■□□□□ 0.73
THUMPD3Q9BV44 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
THUMPD3Q9BV44 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
THUMPD3Q9BV44 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
THUMPD3Q9BV44 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
THUMPD3Q9BV44 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.59■□□□□ 0.73
THUMPD3Q9BV44 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.59■□□□□ 0.73
THUMPD3Q9BV44 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
THUMPD3Q9BV44 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
THUMPD3Q9BV44 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.59■□□□□ 0.73
THUMPD3Q9BV44 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
THUMPD3Q9BV44 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
THUMPD3Q9BV44 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.58■□□□□ 0.73
THUMPD3Q9BV44 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.58■□□□□ 0.73
THUMPD3Q9BV44 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
THUMPD3Q9BV44 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.58■□□□□ 0.73
THUMPD3Q9BV44 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
THUMPD3Q9BV44 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
THUMPD3Q9BV44 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
THUMPD3Q9BV44 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.58■□□□□ 0.73
THUMPD3Q9BV44 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
THUMPD3Q9BV44 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
THUMPD3Q9BV44 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
THUMPD3Q9BV44 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
THUMPD3Q9BV44 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.58■□□□□ 0.72
THUMPD3Q9BV44 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.58■□□□□ 0.72
THUMPD3Q9BV44 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
THUMPD3Q9BV44 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.58■□□□□ 0.72
THUMPD3Q9BV44 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
THUMPD3Q9BV44 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.58■□□□□ 0.72
THUMPD3Q9BV44 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
THUMPD3Q9BV44 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
THUMPD3Q9BV44 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
THUMPD3Q9BV44 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
THUMPD3Q9BV44 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
THUMPD3Q9BV44 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.57■□□□□ 0.72
THUMPD3Q9BV44 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
THUMPD3Q9BV44 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.57■□□□□ 0.72
THUMPD3Q9BV44 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
THUMPD3Q9BV44 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
THUMPD3Q9BV44 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
THUMPD3Q9BV44 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
THUMPD3Q9BV44 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
THUMPD3Q9BV44 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
THUMPD3Q9BV44 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
THUMPD3Q9BV44 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
THUMPD3Q9BV44 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.57■□□□□ 0.72
THUMPD3Q9BV44 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.57■□□□□ 0.72
THUMPD3Q9BV44 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
THUMPD3Q9BV44 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
THUMPD3Q9BV44 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
THUMPD3Q9BV44 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
THUMPD3Q9BV44 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.56■□□□□ 0.72
THUMPD3Q9BV44 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.56■□□□□ 0.72
THUMPD3Q9BV44 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
THUMPD3Q9BV44 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
THUMPD3Q9BV44 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
THUMPD3Q9BV44 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms