Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
YIPF4Q9BSR8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.32■□□□□ 0.68
YIPF4Q9BSR8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
YIPF4Q9BSR8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
YIPF4Q9BSR8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
YIPF4Q9BSR8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
YIPF4Q9BSR8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
YIPF4Q9BSR8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
YIPF4Q9BSR8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.31■□□□□ 0.68
YIPF4Q9BSR8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
YIPF4Q9BSR8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
YIPF4Q9BSR8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.31■□□□□ 0.68
YIPF4Q9BSR8 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
YIPF4Q9BSR8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
YIPF4Q9BSR8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
YIPF4Q9BSR8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.31■□□□□ 0.68
YIPF4Q9BSR8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.31■□□□□ 0.68
YIPF4Q9BSR8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
YIPF4Q9BSR8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
YIPF4Q9BSR8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.3■□□□□ 0.68
YIPF4Q9BSR8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF4Q9BSR8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF4Q9BSR8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF4Q9BSR8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.3■□□□□ 0.68
YIPF4Q9BSR8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
YIPF4Q9BSR8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF4Q9BSR8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF4Q9BSR8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
YIPF4Q9BSR8 AC245052.3-201ENST00000450182 901 ntBASIC19.3■□□□□ 0.68
YIPF4Q9BSR8 NTF6G-201ENST00000591094 616 ntBASIC19.3■□□□□ 0.68
YIPF4Q9BSR8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.3■□□□□ 0.68
YIPF4Q9BSR8 FP700111.2-201ENST00000619190 1892 ntBASIC19.3■□□□□ 0.68
YIPF4Q9BSR8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
YIPF4Q9BSR8 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF4Q9BSR8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.3■□□□□ 0.68
YIPF4Q9BSR8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF4Q9BSR8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF4Q9BSR8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF4Q9BSR8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF4Q9BSR8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
YIPF4Q9BSR8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.3■□□□□ 0.68
YIPF4Q9BSR8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
YIPF4Q9BSR8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.3■□□□□ 0.68
YIPF4Q9BSR8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.29■□□□□ 0.68
YIPF4Q9BSR8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
YIPF4Q9BSR8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YIPF4Q9BSR8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
YIPF4Q9BSR8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
YIPF4Q9BSR8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YIPF4Q9BSR8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
YIPF4Q9BSR8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YIPF4Q9BSR8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
YIPF4Q9BSR8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YIPF4Q9BSR8 AC004911.1-201ENST00000416316 871 ntBASIC19.29■□□□□ 0.68
YIPF4Q9BSR8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.29■□□□□ 0.68
YIPF4Q9BSR8 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
YIPF4Q9BSR8 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.29■□□□□ 0.68
YIPF4Q9BSR8 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
YIPF4Q9BSR8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.29■□□□□ 0.68
YIPF4Q9BSR8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YIPF4Q9BSR8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YIPF4Q9BSR8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YIPF4Q9BSR8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YIPF4Q9BSR8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
YIPF4Q9BSR8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 AC073130.3-201ENST00000624389 2278 ntBASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 AC011484.1-201ENST00000377652 1995 ntBASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 KRT19P1-201ENST00000405746 1186 ntBASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 AC073314.1-201ENST00000568729 2216 ntBASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 AC007225.1-201ENST00000566331 1836 ntBASIC19.28■□□□□ 0.68
YIPF4Q9BSR8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
YIPF4Q9BSR8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
YIPF4Q9BSR8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
YIPF4Q9BSR8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
YIPF4Q9BSR8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
YIPF4Q9BSR8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
YIPF4Q9BSR8 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
YIPF4Q9BSR8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms