Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMOQ99835 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMOQ99835 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMOQ99835 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.65■■□□□ 1.06
SMOQ99835 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMOQ99835 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMOQ99835 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.65■■□□□ 1.06
SMOQ99835 KRT18P68-201ENST00000392293 1000 ntBASIC21.65■■□□□ 1.06
SMOQ99835 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMOQ99835 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMOQ99835 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.65■■□□□ 1.06
SMOQ99835 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.65■■□□□ 1.06
SMOQ99835 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.65■■□□□ 1.06
SMOQ99835 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMOQ99835 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SMOQ99835 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SMOQ99835 PLK5-205ENST00000642079 1969 ntBASIC21.65■■□□□ 1.06
SMOQ99835 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMOQ99835 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SMOQ99835 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SMOQ99835 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.64■■□□□ 1.06
SMOQ99835 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.64■■□□□ 1.06
SMOQ99835 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SMOQ99835 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMOQ99835 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMOQ99835 LSM12P1-201ENST00000411836 588 ntBASIC21.64■■□□□ 1.05
SMOQ99835 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.64■■□□□ 1.05
SMOQ99835 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SMOQ99835 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.64■■□□□ 1.05
SMOQ99835 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
SMOQ99835 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.64■■□□□ 1.05
SMOQ99835 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SMOQ99835 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SMOQ99835 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMOQ99835 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.64■■□□□ 1.05
SMOQ99835 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.63■■□□□ 1.05
SMOQ99835 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMOQ99835 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SMOQ99835 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
SMOQ99835 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
SMOQ99835 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMOQ99835 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMOQ99835 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SMOQ99835 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMOQ99835 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
SMOQ99835 DUSP5P2-201ENST00000426873 1033 ntBASIC21.63■■□□□ 1.05
SMOQ99835 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.63■■□□□ 1.05
SMOQ99835 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.63■■□□□ 1.05
SMOQ99835 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
SMOQ99835 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.63■■□□□ 1.05
SMOQ99835 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SMOQ99835 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.63■■□□□ 1.05
SMOQ99835 MYC-209ENST00000641252 345 ntBASIC21.63■■□□□ 1.05
SMOQ99835 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMOQ99835 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.63■■□□□ 1.05
SMOQ99835 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SMOQ99835 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SMOQ99835 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMOQ99835 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMOQ99835 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.62■■□□□ 1.05
SMOQ99835 AC027702.1-201ENST00000563810 1770 ntBASIC21.62■■□□□ 1.05
SMOQ99835 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SMOQ99835 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMOQ99835 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SMOQ99835 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.62■■□□□ 1.05
SMOQ99835 AC091874.3-201ENST00000512672 1195 ntBASIC21.62■■□□□ 1.05
SMOQ99835 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.62■■□□□ 1.05
SMOQ99835 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SMOQ99835 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMOQ99835 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMOQ99835 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMOQ99835 AC087633.2-202ENST00000565166 1439 ntBASIC21.62■■□□□ 1.05
SMOQ99835 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMOQ99835 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.62■■□□□ 1.05
SMOQ99835 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
SMOQ99835 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMOQ99835 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
SMOQ99835 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.61■■□□□ 1.05
SMOQ99835 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SMOQ99835 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.61■■□□□ 1.05
SMOQ99835 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMOQ99835 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMOQ99835 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMOQ99835 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
SMOQ99835 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMOQ99835 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SMOQ99835 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.6■■□□□ 1.05
SMOQ99835 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMOQ99835 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.6■■□□□ 1.05
SMOQ99835 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.6■■□□□ 1.05
SMOQ99835 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMOQ99835 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMOQ99835 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMOQ99835 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.6■■□□□ 1.05
SMOQ99835 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMOQ99835 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SMOQ99835 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMOQ99835 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.6■■□□□ 1.05
SMOQ99835 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.6■■□□□ 1.05
SMOQ99835 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms