Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCL13Q99616 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCL13Q99616 PLK5-205ENST00000642079 1969 ntBASIC17.22■□□□□ 0.35
CCL13Q99616 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL13Q99616 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL13Q99616 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.22■□□□□ 0.35
CCL13Q99616 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCL13Q99616 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
CCL13Q99616 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCL13Q99616 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL13Q99616 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCL13Q99616 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CCL13Q99616 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCL13Q99616 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCL13Q99616 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL13Q99616 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL13Q99616 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.21■□□□□ 0.35
CCL13Q99616 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CCL13Q99616 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CCL13Q99616 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CCL13Q99616 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL13Q99616 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.21■□□□□ 0.35
CCL13Q99616 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.21■□□□□ 0.35
CCL13Q99616 CROCCP5-201ENST00000436658 830 ntBASIC17.21■□□□□ 0.35
CCL13Q99616 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCL13Q99616 AC006970.2-201ENST00000450065 779 ntBASIC17.21■□□□□ 0.35
CCL13Q99616 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL13Q99616 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.21■□□□□ 0.35
CCL13Q99616 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CCL13Q99616 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL13Q99616 AC008694.1-202ENST00000636953 945 ntBASIC17.21■□□□□ 0.35
CCL13Q99616 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL13Q99616 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL13Q99616 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCL13Q99616 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CCL13Q99616 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCL13Q99616 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCL13Q99616 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL13Q99616 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCL13Q99616 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CCL13Q99616 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CCL13Q99616 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.2■□□□□ 0.34
CCL13Q99616 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCL13Q99616 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
CCL13Q99616 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL13Q99616 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.2■□□□□ 0.34
CCL13Q99616 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CCL13Q99616 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.2■□□□□ 0.34
CCL13Q99616 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.2■□□□□ 0.34
CCL13Q99616 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL13Q99616 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.2■□□□□ 0.34
CCL13Q99616 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL13Q99616 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CCL13Q99616 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL13Q99616 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL13Q99616 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCL13Q99616 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.2■□□□□ 0.34
CCL13Q99616 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CCL13Q99616 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCL13Q99616 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.2■□□□□ 0.34
CCL13Q99616 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
CCL13Q99616 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL13Q99616 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CCL13Q99616 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL13Q99616 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CCL13Q99616 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
CCL13Q99616 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL13Q99616 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.19■□□□□ 0.34
CCL13Q99616 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.19■□□□□ 0.34
CCL13Q99616 AL162412.1-201ENST00000567129 965 ntBASIC17.19■□□□□ 0.34
CCL13Q99616 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CCL13Q99616 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL13Q99616 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CCL13Q99616 AC069236.1-201ENST00000604339 616 ntBASIC17.19■□□□□ 0.34
CCL13Q99616 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.19■□□□□ 0.34
CCL13Q99616 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCL13Q99616 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.19■□□□□ 0.34
CCL13Q99616 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.18■□□□□ 0.34
CCL13Q99616 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
CCL13Q99616 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CCL13Q99616 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
CCL13Q99616 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CCL13Q99616 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.18■□□□□ 0.34
CCL13Q99616 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCL13Q99616 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCL13Q99616 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCL13Q99616 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.18■□□□□ 0.34
CCL13Q99616 FAM21FP-204ENST00000608637 956 ntBASIC17.18■□□□□ 0.34
CCL13Q99616 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCL13Q99616 AL050303.2-201ENST00000619798 666 ntBASIC17.18■□□□□ 0.34
CCL13Q99616 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.18■□□□□ 0.34
CCL13Q99616 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.18■□□□□ 0.34
CCL13Q99616 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
CCL13Q99616 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCL13Q99616 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CCL13Q99616 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCL13Q99616 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCL13Q99616 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.18■□□□□ 0.34
CCL13Q99616 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
CCL13Q99616 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms