Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
NDNQ99608 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NDNQ99608 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.56■□□□□ 0.88
NDNQ99608 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NDNQ99608 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
NDNQ99608 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NDNQ99608 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NDNQ99608 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NDNQ99608 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
NDNQ99608 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NDNQ99608 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NDNQ99608 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NDNQ99608 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NDNQ99608 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NDNQ99608 DUX4L2-201ENST00000561772 1275 ntBASIC20.55■□□□□ 0.88
NDNQ99608 AP001160.3-201ENST00000601484 763 ntBASIC20.55■□□□□ 0.88
NDNQ99608 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.55■□□□□ 0.88
NDNQ99608 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
NDNQ99608 DUX4L6-201ENST00000626483 1275 ntBASIC20.55■□□□□ 0.88
NDNQ99608 DUX4L1-201ENST00000627662 1275 ntBASIC20.55■□□□□ 0.88
NDNQ99608 DUX4L8-201ENST00000629013 1275 ntBASIC20.55■□□□□ 0.88
NDNQ99608 DUX4L3-201ENST00000630187 1275 ntBASIC20.55■□□□□ 0.88
NDNQ99608 DUX4L7-201ENST00000630678 1275 ntBASIC20.55■□□□□ 0.88
NDNQ99608 DUX4L5-201ENST00000630834 1275 ntBASIC20.55■□□□□ 0.88
NDNQ99608 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NDNQ99608 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NDNQ99608 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NDNQ99608 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NDNQ99608 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
NDNQ99608 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.54■□□□□ 0.88
NDNQ99608 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NDNQ99608 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NDNQ99608 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NDNQ99608 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NDNQ99608 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NDNQ99608 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.54■□□□□ 0.88
NDNQ99608 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.54■□□□□ 0.88
NDNQ99608 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.54■□□□□ 0.88
NDNQ99608 RARRES2P11-201ENST00000635158 484 ntBASIC20.54■□□□□ 0.88
NDNQ99608 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NDNQ99608 AC007225.1-201ENST00000566331 1836 ntBASIC20.54■□□□□ 0.88
NDNQ99608 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.54■□□□□ 0.88
NDNQ99608 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
NDNQ99608 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NDNQ99608 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NDNQ99608 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
NDNQ99608 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
NDNQ99608 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NDNQ99608 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
NDNQ99608 FP700111.2-201ENST00000619190 1892 ntBASIC20.54■□□□□ 0.88
NDNQ99608 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDNQ99608 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDNQ99608 KRT16P2-201ENST00000414673 1423 ntBASIC20.53■□□□□ 0.88
NDNQ99608 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDNQ99608 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDNQ99608 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.53■□□□□ 0.88
NDNQ99608 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.53■□□□□ 0.88
NDNQ99608 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.53■□□□□ 0.88
NDNQ99608 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NDNQ99608 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.53■□□□□ 0.88
NDNQ99608 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.53■□□□□ 0.88
NDNQ99608 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDNQ99608 AC011484.1-201ENST00000377652 1995 ntBASIC20.53■□□□□ 0.88
NDNQ99608 AP005212.1-201ENST00000581547 1997 ntBASIC20.53■□□□□ 0.88
NDNQ99608 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDNQ99608 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
NDNQ99608 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NDNQ99608 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDNQ99608 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NDNQ99608 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NDNQ99608 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
NDNQ99608 AC027702.1-201ENST00000563810 1770 ntBASIC20.52■□□□□ 0.88
NDNQ99608 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.52■□□□□ 0.88
NDNQ99608 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
NDNQ99608 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NDNQ99608 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.52■□□□□ 0.88
NDNQ99608 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
NDNQ99608 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.52■□□□□ 0.88
NDNQ99608 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.52■□□□□ 0.88
NDNQ99608 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.52■□□□□ 0.88
NDNQ99608 AC120498.10-201ENST00000621827 505 ntBASIC20.52■□□□□ 0.88
NDNQ99608 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NDNQ99608 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NDNQ99608 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NDNQ99608 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NDNQ99608 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NDNQ99608 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.52■□□□□ 0.88
NDNQ99608 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NDNQ99608 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NDNQ99608 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.51■□□□□ 0.87
NDNQ99608 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NDNQ99608 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.51■□□□□ 0.87
NDNQ99608 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NDNQ99608 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NDNQ99608 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NDNQ99608 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
NDNQ99608 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NDNQ99608 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NDNQ99608 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NDNQ99608 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms