Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 NEJ1YLR265C 1029 nt1.56□□□□□ -2.16
ATG40Q99325 YMR158C-AYMR158C-A 138 nt1.56□□□□□ -2.16
ATG40Q99325 YMR306C-AYMR306C-A 390 nt1.56□□□□□ -2.16
ATG40Q99325 RPL16BYNL069C 597 nt1.56□□□□□ -2.16
ATG40Q99325 CUP9YPL177C 921 nt1.56□□□□□ -2.16
ATG40Q99325 RRP15YPR143W 753 nt1.56□□□□□ -2.16
ATG40Q99325 YBR277CYBR277C 402 nt1.56□□□□□ -2.16
ATG40Q99325 MFB1YDR219C 1398 nt1.56□□□□□ -2.16
ATG40Q99325 GDI1YER136W 1356 nt1.56□□□□□ -2.16
ATG40Q99325 SPT14YPL175W 1359 nt1.56□□□□□ -2.16
ATG40Q99325 PRP6YBR055C 2700 nt1.55□□□□□ -2.16
ATG40Q99325 HYM1YKL189W 1200 nt1.55□□□□□ -2.16
ATG40Q99325 UTP5YDR398W 1932 nt1.55□□□□□ -2.16
ATG40Q99325 CTF13YMR094W 1437 nt1.55□□□□□ -2.16
ATG40Q99325 SSQ1YLR369W 1974 nt1.54□□□□□ -2.16
ATG40Q99325 CHC1YGL206C 4962 nt1.54□□□□□ -2.16
ATG40Q99325 VPS16YPL045W 2397 nt1.54□□□□□ -2.16
ATG40Q99325 SDC1YDR469W 528 nt1.54□□□□□ -2.16
ATG40Q99325 STE2YFL026W 1296 nt1.54□□□□□ -2.16
ATG40Q99325 OST5YGL226C-A 261 nt1.54□□□□□ -2.16
ATG40Q99325 YGR053CYGR053C 852 nt1.54□□□□□ -2.16
ATG40Q99325 YHR210CYHR210C 1026 nt1.54□□□□□ -2.16
ATG40Q99325 YLR379WYLR379W 375 nt1.54□□□□□ -2.16
ATG40Q99325 YMR272W-BYMR272W-B 108 nt1.54□□□□□ -2.16
ATG40Q99325 TRM7YBR061C 933 nt1.54□□□□□ -2.16
ATG40Q99325 YPR089WYPR089W 2667 nt1.54□□□□□ -2.16
ATG40Q99325 YDR338CYDR338C 2088 nt1.54□□□□□ -2.16
ATG40Q99325 YEL043WYEL043W 2871 nt1.53□□□□□ -2.16
ATG40Q99325 ATC1YDR184C 885 nt1.53□□□□□ -2.16
ATG40Q99325 MIC19YFR011C 513 nt1.53□□□□□ -2.16
ATG40Q99325 PCL5YHR071W 690 nt1.53□□□□□ -2.16
ATG40Q99325 GPX1YKL026C 504 nt1.53□□□□□ -2.16
ATG40Q99325 CST9YLR394W 1449 nt1.53□□□□□ -2.16
ATG40Q99325 GAL80YML051W 1308 nt1.53□□□□□ -2.16
ATG40Q99325 ICY1YMR195W 384 nt1.53□□□□□ -2.16
ATG40Q99325 YBL062WYBL062W 381 nt1.53□□□□□ -2.16
ATG40Q99325 STI1YOR027W 1770 nt1.53□□□□□ -2.16
ATG40Q99325 UBS1YBR165W 834 nt1.53□□□□□ -2.16
ATG40Q99325 SRP1YNL189W 1629 nt1.52□□□□□ -2.17
ATG40Q99325 RAD18YCR066W 1464 nt1.52□□□□□ -2.17
ATG40Q99325 MSL5YLR116W 1431 nt1.52□□□□□ -2.17
ATG40Q99325 ATP16YDL004W 483 nt1.52□□□□□ -2.17
ATG40Q99325 BUD26YDR241W 288 nt1.52□□□□□ -2.17
ATG40Q99325 BTN2YGR142W 1233 nt1.52□□□□□ -2.17
ATG40Q99325 CUP1-1YHR053C 186 nt1.52□□□□□ -2.17
ATG40Q99325 CUP1-2YHR055C 186 nt1.52□□□□□ -2.17
ATG40Q99325 MTG1YMR097C 1104 nt1.52□□□□□ -2.17
ATG40Q99325 VTI1YMR197C 654 nt1.52□□□□□ -2.17
ATG40Q99325 YBR062CYBR062C 543 nt1.52□□□□□ -2.17
ATG40Q99325 MED8YBR193C 672 nt1.52□□□□□ -2.17
ATG40Q99325 AME1YBR211C 975 nt1.52□□□□□ -2.17
ATG40Q99325 YCL007CYCL007C 393 nt1.52□□□□□ -2.17
ATG40Q99325 YCL023CYCL023C 348 nt1.52□□□□□ -2.17
ATG40Q99325 RRP6YOR001W 2202 nt1.52□□□□□ -2.17
ATG40Q99325 IRC10YOL015W 1761 nt1.52□□□□□ -2.17
ATG40Q99325 NGG1YDR176W 2109 nt1.51□□□□□ -2.17
ATG40Q99325 YDR199WYDR199W 366 nt1.51□□□□□ -2.17
ATG40Q99325 YGR226CYGR226C 210 nt1.51□□□□□ -2.17
ATG40Q99325 CAP1YKL007W 807 nt1.51□□□□□ -2.17
ATG40Q99325 YLR224WYLR224W 1110 nt1.51□□□□□ -2.17
ATG40Q99325 SMD2YLR275W 333 nt1.51□□□□□ -2.17
ATG40Q99325 YMR144WYMR144W 1029 nt1.51□□□□□ -2.17
ATG40Q99325 MIX23YBL107C 591 nt1.51□□□□□ -2.17
ATG40Q99325 SRL4YPL033C 846 nt1.51□□□□□ -2.17
ATG40Q99325 YBR051WYBR051W 351 nt1.51□□□□□ -2.17
ATG40Q99325 ARL1YBR164C 552 nt1.51□□□□□ -2.17
ATG40Q99325 YBR197CYBR197C 654 nt1.51□□□□□ -2.17
ATG40Q99325 ECM5YMR176W 4236 nt1.51□□□□□ -2.17
ATG40Q99325 DFG16YOR030W 1860 nt1.5□□□□□ -2.17
ATG40Q99325 YPS5YGL259W 498 nt1.5□□□□□ -2.17
ATG40Q99325 PRP38YGR075C 729 nt1.5□□□□□ -2.17
ATG40Q99325 tT(UGU)HtT(UGU)H 72 nt1.5□□□□□ -2.17
ATG40Q99325 TPK3YKL166C 1197 nt1.5□□□□□ -2.17
ATG40Q99325 YNR021WYNR021W 1215 nt1.5□□□□□ -2.17
ATG40Q99325 PRK1YIL095W 2433 nt1.5□□□□□ -2.17
ATG40Q99325 BPH1YCR032W 6504 nt1.5□□□□□ -2.17
ATG40Q99325 PEP1YBL017C 4740 nt1.49□□□□□ -2.17
ATG40Q99325 BAS1YKR099W 2436 nt1.49□□□□□ -2.17
ATG40Q99325 VPS15YBR097W 4365 nt1.49□□□□□ -2.17
ATG40Q99325 YCR099CYCR099C 468 nt1.49□□□□□ -2.17
ATG40Q99325 SRB7YDR308C 423 nt1.49□□□□□ -2.17
ATG40Q99325 RMD6YEL072W 696 nt1.49□□□□□ -2.17
ATG40Q99325 YER138W-AYER138W-A 105 nt1.49□□□□□ -2.17
ATG40Q99325 YIL058WYIL058W 285 nt1.49□□□□□ -2.17
ATG40Q99325 YJL156W-AYJL156W-A 222 nt1.49□□□□□ -2.17
ATG40Q99325 CMC1YKL137W 336 nt1.49□□□□□ -2.17
ATG40Q99325 RPS30AYLR287C-A 192 nt1.49□□□□□ -2.17
ATG40Q99325 SWM2YNR004W 441 nt1.49□□□□□ -2.17
ATG40Q99325 YOL085W-AYOL085W-A 213 nt1.49□□□□□ -2.17
ATG40Q99325 YBL107W-AYBL107W-A 105 nt1.49□□□□□ -2.17
ATG40Q99325 MGE1YOR232W 687 nt1.49□□□□□ -2.17
ATG40Q99325 VPS8YAL002W 3825 nt1.49□□□□□ -2.17
ATG40Q99325 PSO2YMR137C 1986 nt1.48□□□□□ -2.17
ATG40Q99325 LST4YKL176C 2487 nt1.48□□□□□ -2.17
ATG40Q99325 PES4YFR023W 1836 nt1.48□□□□□ -2.17
ATG40Q99325 IST2YBR086C 2841 nt1.48□□□□□ -2.17
ATG40Q99325 NSE4YDL105W 1209 nt1.48□□□□□ -2.17
ATG40Q99325 SLU7YDR088C 1149 nt1.48□□□□□ -2.17
ATG40Q99325 YGL165CYGL165C 579 nt1.48□□□□□ -2.17
ATG40Q99325 YOR343W-BYOR343W-B 5313 nt1.48□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 20.8 ms