Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.36■□□□□ 0.69
NR1H4Q96RI1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NR1H4Q96RI1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NR1H4Q96RI1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NR1H4Q96RI1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
NR1H4Q96RI1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NR1H4Q96RI1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NR1H4Q96RI1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
NR1H4Q96RI1 AC020916.1-201ENST00000587762 1774 ntBASIC19.35■□□□□ 0.69
NR1H4Q96RI1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NR1H4Q96RI1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NR1H4Q96RI1 AC079089.2-201ENST00000531211 1277 ntBASIC19.35■□□□□ 0.69
NR1H4Q96RI1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.35■□□□□ 0.69
NR1H4Q96RI1 AC019171.1-201ENST00000601251 1056 ntBASIC19.35■□□□□ 0.69
NR1H4Q96RI1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NR1H4Q96RI1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NR1H4Q96RI1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NR1H4Q96RI1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
NR1H4Q96RI1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NR1H4Q96RI1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NR1H4Q96RI1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NR1H4Q96RI1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NR1H4Q96RI1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NR1H4Q96RI1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NR1H4Q96RI1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NR1H4Q96RI1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NR1H4Q96RI1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NR1H4Q96RI1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NR1H4Q96RI1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NR1H4Q96RI1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.34■□□□□ 0.69
NR1H4Q96RI1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
NR1H4Q96RI1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.34■□□□□ 0.69
NR1H4Q96RI1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NR1H4Q96RI1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.34■□□□□ 0.69
NR1H4Q96RI1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NR1H4Q96RI1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
NR1H4Q96RI1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.34■□□□□ 0.69
NR1H4Q96RI1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NR1H4Q96RI1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
NR1H4Q96RI1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.33■□□□□ 0.69
NR1H4Q96RI1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
NR1H4Q96RI1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NR1H4Q96RI1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.33■□□□□ 0.69
NR1H4Q96RI1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.33■□□□□ 0.69
NR1H4Q96RI1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NR1H4Q96RI1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NR1H4Q96RI1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
NR1H4Q96RI1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.33■□□□□ 0.68
NR1H4Q96RI1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
NR1H4Q96RI1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NR1H4Q96RI1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
NR1H4Q96RI1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.33■□□□□ 0.68
NR1H4Q96RI1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NR1H4Q96RI1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NR1H4Q96RI1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NR1H4Q96RI1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
NR1H4Q96RI1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NR1H4Q96RI1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
NR1H4Q96RI1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.33■□□□□ 0.68
NR1H4Q96RI1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.33■□□□□ 0.68
NR1H4Q96RI1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.32■□□□□ 0.68
NR1H4Q96RI1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.32■□□□□ 0.68
NR1H4Q96RI1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H4Q96RI1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H4Q96RI1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
NR1H4Q96RI1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.32■□□□□ 0.68
NR1H4Q96RI1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H4Q96RI1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H4Q96RI1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.32■□□□□ 0.68
NR1H4Q96RI1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.32■□□□□ 0.68
NR1H4Q96RI1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H4Q96RI1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.32■□□□□ 0.68
NR1H4Q96RI1 AC010980.1-201ENST00000587192 1142 ntBASIC19.32■□□□□ 0.68
NR1H4Q96RI1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
NR1H4Q96RI1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H4Q96RI1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H4Q96RI1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.32■□□□□ 0.68
NR1H4Q96RI1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H4Q96RI1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.32■□□□□ 0.68
NR1H4Q96RI1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H4Q96RI1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
NR1H4Q96RI1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H4Q96RI1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H4Q96RI1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.32■□□□□ 0.68
NR1H4Q96RI1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NR1H4Q96RI1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NR1H4Q96RI1 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.31■□□□□ 0.68
NR1H4Q96RI1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NR1H4Q96RI1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NR1H4Q96RI1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NR1H4Q96RI1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NR1H4Q96RI1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NR1H4Q96RI1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NR1H4Q96RI1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NR1H4Q96RI1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NR1H4Q96RI1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
NR1H4Q96RI1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NR1H4Q96RI1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.31■□□□□ 0.68
NR1H4Q96RI1 AC120024.1-201ENST00000562672 995 ntBASIC19.31■□□□□ 0.68
NR1H4Q96RI1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms