Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CASD1Q96PB1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC22.1■■□□□ 1.13
CASD1Q96PB1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC22.1■■□□□ 1.13
CASD1Q96PB1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CASD1Q96PB1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CASD1Q96PB1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CASD1Q96PB1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CASD1Q96PB1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CASD1Q96PB1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CASD1Q96PB1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
CASD1Q96PB1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.09■■□□□ 1.13
CASD1Q96PB1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CASD1Q96PB1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CASD1Q96PB1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CASD1Q96PB1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CASD1Q96PB1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.09■■□□□ 1.13
CASD1Q96PB1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.09■■□□□ 1.13
CASD1Q96PB1 MIR718-201ENST00000390190 70 ntBASIC22.09■■□□□ 1.13
CASD1Q96PB1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CASD1Q96PB1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CASD1Q96PB1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CASD1Q96PB1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
CASD1Q96PB1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC22.09■■□□□ 1.13
CASD1Q96PB1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CASD1Q96PB1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
CASD1Q96PB1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CASD1Q96PB1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
CASD1Q96PB1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CASD1Q96PB1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CASD1Q96PB1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CASD1Q96PB1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CASD1Q96PB1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CASD1Q96PB1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.08■■□□□ 1.13
CASD1Q96PB1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CASD1Q96PB1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC22.08■■□□□ 1.13
CASD1Q96PB1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.08■■□□□ 1.13
CASD1Q96PB1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CASD1Q96PB1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CASD1Q96PB1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CASD1Q96PB1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CASD1Q96PB1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CASD1Q96PB1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CASD1Q96PB1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CASD1Q96PB1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CASD1Q96PB1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC22.07■■□□□ 1.12
CASD1Q96PB1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CASD1Q96PB1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
CASD1Q96PB1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.07■■□□□ 1.12
CASD1Q96PB1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CASD1Q96PB1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CASD1Q96PB1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
CASD1Q96PB1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CASD1Q96PB1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.07■■□□□ 1.12
CASD1Q96PB1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CASD1Q96PB1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
CASD1Q96PB1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CASD1Q96PB1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CASD1Q96PB1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC22.06■■□□□ 1.12
CASD1Q96PB1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.06■■□□□ 1.12
CASD1Q96PB1 PGM5P4-201ENST00000421970 445 ntBASIC22.06■■□□□ 1.12
CASD1Q96PB1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.06■■□□□ 1.12
CASD1Q96PB1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CASD1Q96PB1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.06■■□□□ 1.12
CASD1Q96PB1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
CASD1Q96PB1 MIR4497-201ENST00000583208 89 ntBASIC22.06■■□□□ 1.12
CASD1Q96PB1 AL356652.1-201ENST00000615962 565 ntBASIC22.06■■□□□ 1.12
CASD1Q96PB1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CASD1Q96PB1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CASD1Q96PB1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CASD1Q96PB1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CASD1Q96PB1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.06■■□□□ 1.12
CASD1Q96PB1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.06■■□□□ 1.12
CASD1Q96PB1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.06■■□□□ 1.12
CASD1Q96PB1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.05■■□□□ 1.12
CASD1Q96PB1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CASD1Q96PB1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.05■■□□□ 1.12
CASD1Q96PB1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CASD1Q96PB1 AC005829.2-201ENST00000571422 1056 ntBASIC22.05■■□□□ 1.12
CASD1Q96PB1 MTDHP1-201ENST00000605323 784 ntBASIC22.05■■□□□ 1.12
CASD1Q96PB1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.05■■□□□ 1.12
CASD1Q96PB1 AC120498.8-201ENST00000614275 531 ntBASIC22.05■■□□□ 1.12
CASD1Q96PB1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.05■■□□□ 1.12
CASD1Q96PB1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
CASD1Q96PB1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.05■■□□□ 1.12
CASD1Q96PB1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
CASD1Q96PB1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.04■■□□□ 1.12
CASD1Q96PB1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.04■■□□□ 1.12
CASD1Q96PB1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
CASD1Q96PB1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CASD1Q96PB1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CASD1Q96PB1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
CASD1Q96PB1 ECEL1P1-201ENST00000373592 1742 ntBASIC22.04■■□□□ 1.12
CASD1Q96PB1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CASD1Q96PB1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CASD1Q96PB1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC22.04■■□□□ 1.12
CASD1Q96PB1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.04■■□□□ 1.12
CASD1Q96PB1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC22.04■■□□□ 1.12
CASD1Q96PB1 AC006557.6-201ENST00000623071 864 ntBASIC22.04■■□□□ 1.12
CASD1Q96PB1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CASD1Q96PB1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms