Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SLC46A1Q96NT5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SLC46A1Q96NT5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SLC46A1Q96NT5 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC46A1Q96NT5 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC46A1Q96NT5 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC46A1Q96NT5 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC46A1Q96NT5 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC46A1Q96NT5 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC46A1Q96NT5 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.72■□□□□ 0.75
SLC46A1Q96NT5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.72■□□□□ 0.75
SLC46A1Q96NT5 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC46A1Q96NT5 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.72■□□□□ 0.75
SLC46A1Q96NT5 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC46A1Q96NT5 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC46A1Q96NT5 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC46A1Q96NT5 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC46A1Q96NT5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC46A1Q96NT5 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC46A1Q96NT5 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC46A1Q96NT5 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC46A1Q96NT5 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC46A1Q96NT5 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC46A1Q96NT5 ECEL1P3-201ENST00000427961 737 ntBASIC19.71■□□□□ 0.75
SLC46A1Q96NT5 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.71■□□□□ 0.75
SLC46A1Q96NT5 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SLC46A1Q96NT5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC46A1Q96NT5 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC46A1Q96NT5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC46A1Q96NT5 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.71■□□□□ 0.75
SLC46A1Q96NT5 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC46A1Q96NT5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.71■□□□□ 0.75
SLC46A1Q96NT5 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC46A1Q96NT5 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC46A1Q96NT5 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC46A1Q96NT5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC46A1Q96NT5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.71■□□□□ 0.75
SLC46A1Q96NT5 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC46A1Q96NT5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SLC46A1Q96NT5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SLC46A1Q96NT5 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.7■□□□□ 0.74
SLC46A1Q96NT5 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
SLC46A1Q96NT5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC46A1Q96NT5 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC46A1Q96NT5 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC46A1Q96NT5 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.7■□□□□ 0.74
SLC46A1Q96NT5 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.7■□□□□ 0.74
SLC46A1Q96NT5 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SLC46A1Q96NT5 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC46A1Q96NT5 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.7■□□□□ 0.74
SLC46A1Q96NT5 REXO1L12P-201ENST00000622156 912 ntBASIC19.7■□□□□ 0.74
SLC46A1Q96NT5 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC46A1Q96NT5 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC46A1Q96NT5 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC46A1Q96NT5 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC46A1Q96NT5 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC46A1Q96NT5 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC46A1Q96NT5 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC46A1Q96NT5 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
SLC46A1Q96NT5 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC46A1Q96NT5 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC46A1Q96NT5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SLC46A1Q96NT5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.7■□□□□ 0.74
SLC46A1Q96NT5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
SLC46A1Q96NT5 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC46A1Q96NT5 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC46A1Q96NT5 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
SLC46A1Q96NT5 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC46A1Q96NT5 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC46A1Q96NT5 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SLC46A1Q96NT5 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC46A1Q96NT5 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC46A1Q96NT5 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC46A1Q96NT5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC46A1Q96NT5 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC46A1Q96NT5 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC46A1Q96NT5 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC46A1Q96NT5 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC46A1Q96NT5 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.69■□□□□ 0.74
SLC46A1Q96NT5 AC233263.1-201ENST00000578059 224 ntBASIC19.69■□□□□ 0.74
SLC46A1Q96NT5 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
SLC46A1Q96NT5 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC46A1Q96NT5 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC46A1Q96NT5 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC46A1Q96NT5 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC46A1Q96NT5 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SLC46A1Q96NT5 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SLC46A1Q96NT5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC46A1Q96NT5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A1Q96NT5 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A1Q96NT5 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A1Q96NT5 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A1Q96NT5 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A1Q96NT5 AC211429.1-201ENST00000415277 523 ntBASIC19.68■□□□□ 0.74
SLC46A1Q96NT5 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A1Q96NT5 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A1Q96NT5 SNORA78-201ENST00000459373 127 ntBASIC19.68■□□□□ 0.74
SLC46A1Q96NT5 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A1Q96NT5 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.68■□□□□ 0.74
SLC46A1Q96NT5 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms