Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
CHAMP1Q96JM3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CHAMP1Q96JM3 EEF1DP3-203ENST00000566025 782 ntBASIC23.84■■□□□ 1.41
CHAMP1Q96JM3 RARRES2P6-201ENST00000567333 442 ntBASIC23.84■■□□□ 1.41
CHAMP1Q96JM3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.84■■□□□ 1.41
CHAMP1Q96JM3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
CHAMP1Q96JM3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CHAMP1Q96JM3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CHAMP1Q96JM3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
CHAMP1Q96JM3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CHAMP1Q96JM3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CHAMP1Q96JM3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.84■■□□□ 1.41
CHAMP1Q96JM3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CHAMP1Q96JM3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC23.83■■□□□ 1.41
CHAMP1Q96JM3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.83■■□□□ 1.41
CHAMP1Q96JM3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
CHAMP1Q96JM3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CHAMP1Q96JM3 PBX2P1-201ENST00000493219 1291 ntBASIC23.83■■□□□ 1.41
CHAMP1Q96JM3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.83■■□□□ 1.41
CHAMP1Q96JM3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.83■■□□□ 1.41
CHAMP1Q96JM3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.83■■□□□ 1.41
CHAMP1Q96JM3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CHAMP1Q96JM3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC23.83■■□□□ 1.41
CHAMP1Q96JM3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CHAMP1Q96JM3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CHAMP1Q96JM3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CHAMP1Q96JM3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.83■■□□□ 1.4
CHAMP1Q96JM3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CHAMP1Q96JM3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CHAMP1Q96JM3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.82■■□□□ 1.4
CHAMP1Q96JM3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHAMP1Q96JM3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
CHAMP1Q96JM3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHAMP1Q96JM3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.82■■□□□ 1.4
CHAMP1Q96JM3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
CHAMP1Q96JM3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC23.82■■□□□ 1.4
CHAMP1Q96JM3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CHAMP1Q96JM3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHAMP1Q96JM3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC23.82■■□□□ 1.4
CHAMP1Q96JM3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHAMP1Q96JM3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHAMP1Q96JM3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.81■■□□□ 1.4
CHAMP1Q96JM3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CHAMP1Q96JM3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHAMP1Q96JM3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHAMP1Q96JM3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHAMP1Q96JM3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHAMP1Q96JM3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CHAMP1Q96JM3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC23.81■■□□□ 1.4
CHAMP1Q96JM3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHAMP1Q96JM3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CHAMP1Q96JM3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CHAMP1Q96JM3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHAMP1Q96JM3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC23.8■■□□□ 1.4
CHAMP1Q96JM3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHAMP1Q96JM3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHAMP1Q96JM3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.8■■□□□ 1.4
CHAMP1Q96JM3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC23.8■■□□□ 1.4
CHAMP1Q96JM3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.8■■□□□ 1.4
CHAMP1Q96JM3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
CHAMP1Q96JM3 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.8■■□□□ 1.4
CHAMP1Q96JM3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
CHAMP1Q96JM3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHAMP1Q96JM3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC23.8■■□□□ 1.4
CHAMP1Q96JM3 AL158211.5-201ENST00000623583 2518 ntBASIC23.8■■□□□ 1.4
CHAMP1Q96JM3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHAMP1Q96JM3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CHAMP1Q96JM3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHAMP1Q96JM3 TCF3P1-201ENST00000423021 1937 ntBASIC23.8■■□□□ 1.4
CHAMP1Q96JM3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23.8■■□□□ 1.4
CHAMP1Q96JM3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.79■■□□□ 1.4
CHAMP1Q96JM3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CHAMP1Q96JM3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHAMP1Q96JM3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.79■■□□□ 1.4
CHAMP1Q96JM3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC23.79■■□□□ 1.4
CHAMP1Q96JM3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHAMP1Q96JM3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHAMP1Q96JM3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
CHAMP1Q96JM3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.79■■□□□ 1.4
CHAMP1Q96JM3 AL031432.3-201ENST00000607698 485 ntBASIC23.79■■□□□ 1.4
CHAMP1Q96JM3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.79■■□□□ 1.4
CHAMP1Q96JM3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CHAMP1Q96JM3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC23.79■■□□□ 1.4
CHAMP1Q96JM3 SMG8-203ENST00000578922 2178 ntBASIC23.79■■□□□ 1.4
CHAMP1Q96JM3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHAMP1Q96JM3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHAMP1Q96JM3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHAMP1Q96JM3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHAMP1Q96JM3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHAMP1Q96JM3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
CHAMP1Q96JM3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHAMP1Q96JM3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC23.78■■□□□ 1.4
CHAMP1Q96JM3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHAMP1Q96JM3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.78■■□□□ 1.4
CHAMP1Q96JM3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.78■■□□□ 1.4
CHAMP1Q96JM3 AF213884.3-201ENST00000563833 479 ntBASIC23.78■■□□□ 1.4
CHAMP1Q96JM3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.78■■□□□ 1.4
CHAMP1Q96JM3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC23.78■■□□□ 1.4
CHAMP1Q96JM3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHAMP1Q96JM3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms