Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE2Q96FN4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE2Q96FN4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE2Q96FN4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPNE2Q96FN4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.8■□□□□ 0.44
CPNE2Q96FN4 PLK5-205ENST00000642079 1969 ntBASIC17.8■□□□□ 0.44
CPNE2Q96FN4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE2Q96FN4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.8■□□□□ 0.44
CPNE2Q96FN4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE2Q96FN4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE2Q96FN4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE2Q96FN4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE2Q96FN4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE2Q96FN4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.8■□□□□ 0.44
CPNE2Q96FN4 MIR939-201ENST00000401314 82 ntBASIC17.8■□□□□ 0.44
CPNE2Q96FN4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.8■□□□□ 0.44
CPNE2Q96FN4 AC012414.1-201ENST00000556676 535 ntBASIC17.8■□□□□ 0.44
CPNE2Q96FN4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE2Q96FN4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE2Q96FN4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CPNE2Q96FN4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.8■□□□□ 0.44
CPNE2Q96FN4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE2Q96FN4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.8■□□□□ 0.44
CPNE2Q96FN4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE2Q96FN4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.8■□□□□ 0.44
CPNE2Q96FN4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CPNE2Q96FN4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE2Q96FN4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE2Q96FN4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE2Q96FN4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE2Q96FN4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE2Q96FN4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.79■□□□□ 0.44
CPNE2Q96FN4 LINC01006-201ENST00000333319 2292 ntBASIC17.79■□□□□ 0.44
CPNE2Q96FN4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CPNE2Q96FN4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.79■□□□□ 0.44
CPNE2Q96FN4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CPNE2Q96FN4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE2Q96FN4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.79■□□□□ 0.44
CPNE2Q96FN4 POU5F1P4-201ENST00000413175 1085 ntBASIC17.79■□□□□ 0.44
CPNE2Q96FN4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE2Q96FN4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.79■□□□□ 0.44
CPNE2Q96FN4 AF213884.3-201ENST00000563833 479 ntBASIC17.79■□□□□ 0.44
CPNE2Q96FN4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.79■□□□□ 0.44
CPNE2Q96FN4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE2Q96FN4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE2Q96FN4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE2Q96FN4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE2Q96FN4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE2Q96FN4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
CPNE2Q96FN4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE2Q96FN4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE2Q96FN4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE2Q96FN4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.78■□□□□ 0.44
CPNE2Q96FN4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE2Q96FN4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CPNE2Q96FN4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.78■□□□□ 0.44
CPNE2Q96FN4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CPNE2Q96FN4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE2Q96FN4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.78■□□□□ 0.44
CPNE2Q96FN4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE2Q96FN4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE2Q96FN4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE2Q96FN4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE2Q96FN4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.78■□□□□ 0.44
CPNE2Q96FN4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.78■□□□□ 0.44
CPNE2Q96FN4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE2Q96FN4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
CPNE2Q96FN4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE2Q96FN4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE2Q96FN4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CPNE2Q96FN4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE2Q96FN4 AP005212.1-201ENST00000581547 1997 ntBASIC17.77■□□□□ 0.44
CPNE2Q96FN4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE2Q96FN4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.77■□□□□ 0.44
CPNE2Q96FN4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE2Q96FN4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE2Q96FN4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.77■□□□□ 0.44
CPNE2Q96FN4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.77■□□□□ 0.44
CPNE2Q96FN4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.77■□□□□ 0.44
CPNE2Q96FN4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.77■□□□□ 0.44
CPNE2Q96FN4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.77■□□□□ 0.44
CPNE2Q96FN4 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.77■□□□□ 0.44
CPNE2Q96FN4 AC120498.10-201ENST00000621827 505 ntBASIC17.77■□□□□ 0.44
CPNE2Q96FN4 AL358852.1-201ENST00000623174 1268 ntBASIC17.77■□□□□ 0.44
CPNE2Q96FN4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CPNE2Q96FN4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE2Q96FN4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CPNE2Q96FN4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CPNE2Q96FN4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CPNE2Q96FN4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CPNE2Q96FN4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE2Q96FN4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE2Q96FN4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.76■□□□□ 0.43
CPNE2Q96FN4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE2Q96FN4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE2Q96FN4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE2Q96FN4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE2Q96FN4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPNE2Q96FN4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.76■□□□□ 0.43
CPNE2Q96FN4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms