Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC47A1Q96FL8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC47A1Q96FL8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC47A1Q96FL8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC47A1Q96FL8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC47A1Q96FL8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC47A1Q96FL8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC47A1Q96FL8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC47A1Q96FL8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC47A1Q96FL8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC47A1Q96FL8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC47A1Q96FL8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC47A1Q96FL8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC47A1Q96FL8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC47A1Q96FL8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC47A1Q96FL8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC47A1Q96FL8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC47A1Q96FL8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC47A1Q96FL8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.36■□□□□ 0.69
SLC47A1Q96FL8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC47A1Q96FL8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC47A1Q96FL8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SLC47A1Q96FL8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC47A1Q96FL8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC47A1Q96FL8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SLC47A1Q96FL8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC47A1Q96FL8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC47A1Q96FL8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC47A1Q96FL8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC47A1Q96FL8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC47A1Q96FL8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC47A1Q96FL8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC47A1Q96FL8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC47A1Q96FL8 RASA4CP-201ENST00000424092 1398 ntBASIC19.35■□□□□ 0.69
SLC47A1Q96FL8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC47A1Q96FL8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC47A1Q96FL8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC47A1Q96FL8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.35■□□□□ 0.69
SLC47A1Q96FL8 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.35■□□□□ 0.69
SLC47A1Q96FL8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.35■□□□□ 0.69
SLC47A1Q96FL8 AC105233.4-201ENST00000642045 216 ntBASIC19.35■□□□□ 0.69
SLC47A1Q96FL8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC47A1Q96FL8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC47A1Q96FL8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC47A1Q96FL8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC47A1Q96FL8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SLC47A1Q96FL8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC47A1Q96FL8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC47A1Q96FL8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC47A1Q96FL8 AC009237.3-201ENST00000393279 1427 ntBASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 AC099778.1-201ENST00000568593 1911 ntBASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 MIR939-201ENST00000401314 82 ntBASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 AC091305.1-201ENST00000479476 895 ntBASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC47A1Q96FL8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.33■□□□□ 0.69
SLC47A1Q96FL8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SLC47A1Q96FL8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC47A1Q96FL8 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC47A1Q96FL8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC47A1Q96FL8 AF213884.3-201ENST00000563833 479 ntBASIC19.33■□□□□ 0.68
SLC47A1Q96FL8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC47A1Q96FL8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC47A1Q96FL8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
SLC47A1Q96FL8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC47A1Q96FL8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC47A1Q96FL8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC47A1Q96FL8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC47A1Q96FL8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC47A1Q96FL8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.32■□□□□ 0.68
SLC47A1Q96FL8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC47A1Q96FL8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC47A1Q96FL8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC47A1Q96FL8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SLC47A1Q96FL8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC47A1Q96FL8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.32■□□□□ 0.68
SLC47A1Q96FL8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms